gatk3的最后一个经典版本3.8

Mark DePristo de35ce800d Consolidate and cleanup GATK Log infrastructure ... -- Moved all scripts, data files, and python programs into private/GATKLogs -- Updated the AWS user creation script to make two derived users: GATK2LogUploader and GATK2LogDownloader with new keys. I'll roll these out in subsequent commit.		2013-02-02 15:06:56 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	- Added more comprehensive tests for consensus creation to RR. Still need to add tests for I/D ops.	2013-02-01 15:37:19 -05:00
public	- Added more comprehensive tests for consensus creation to RR. Still need to add tests for I/D ops.	2013-02-01 15:37:19 -05:00
settings	Rev picard, sam-jdk, and tribble	2013-02-01 13:51:30 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Move AWS keys to a resources subdirectory within the phonehome package	2013-01-31 11:56:34 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00