gatk3的最后一个经典版本3.8
 
 
 
 
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Ryan Poplin dd1b0a48db Bug fix in AssessNA12878 when working with more than one contig.
-- SmartSiteIterator needs to know to span across Chunks when iterating by polling the Chunk list
-- Added KB test to test for this case
-- Removed the maxSites argument in ExtractConsensusSites because it is counterintuitive and not useful.
2014-03-21 14:52:10 -04:00
licensing deleted old license files 2013-07-02 16:36:47 -04:00
protected Several improvements to GenotypeGVCFs: --includeNonVariantSites now actually works and we propagate AD to hom ref samples 2014-03-20 00:35:54 -04:00
public Merge pull request #577 from broadinstitute/eb_minor_fixes_for_fragment_utils 2014-03-21 14:01:44 -04:00
settings/helpTemplates Replaced local drmaa and Jama artifacts with versions from maven central. 2014-02-22 01:21:35 +08:00
.gitignore Adding the external example to the build. 2014-02-15 01:26:07 +08:00
README.md Update README file for the 2.6 release 2013-06-20 13:08:29 -04:00
ant-bridge.sh Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests 2014-03-10 21:24:03 -04:00
intellij_example.tar.bz2 Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!) 2012-09-27 11:04:56 -04:00
pom.xml Update pom versions to mark the start of GATK 3.2 development 2014-03-18 01:18:59 -04:00

README.md

The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/