..
Aligner.xml
Cleanup and formatting overhaul.
2010-01-21 19:22:56 +00:00
AnalyzeConcordance.xml
Added a playground concordance analyzer for summarizing VariantEval across a group.
2010-02-22 20:28:52 +00:00
AnalyzeCovariates.xml
A few more bug fixes based on extended testing. Sorry, Eric.
2010-01-21 22:12:16 +00:00
CreatePackager.xsl
Tweak the layout of the resulting .tar.bz2 a bit.
2010-01-27 22:07:37 +00:00
FindContaminatingReadGroups.xml
Cleanup and formatting overhaul.
2010-01-21 19:22:56 +00:00
GATK-Picard.xml
A few more bug fixes based on extended testing. Sorry, Eric.
2010-01-21 22:12:16 +00:00
GATKResources.xml
Cleanup and formatting overhaul.
2010-01-21 19:22:56 +00:00
GenomeAnalysisTK.xml
removing a reference to the VCFValidator, which is gone.
2010-03-11 21:32:17 +00:00
IndelGenotyper.xml
Bringing IndelGenotyper back to life
2010-02-03 20:12:49 +00:00
LocalRealignmentAroundIndels.xml
Since IntervalCleaner is gone for good, it is sensible to update the package to refer to the new IndelRealigner instead
2010-02-24 16:42:56 +00:00
PicardPrivate.xml
Fix for Kiran's sharding issue (Invalid GZIP header). General cleanup of
2010-03-29 03:21:27 +00:00
QualityScoresRecalibration.xml
A few more bug fixes based on extended testing. Sorry, Eric.
2010-01-21 22:12:16 +00:00
UnifiedGenotyper.xml
Cleanup and formatting overhaul.
2010-01-21 19:22:56 +00:00
VariantAnnotator.xml
updating the package
2010-03-19 13:42:31 +00:00
VariantEval.xml
Added VariantEval to the GATK release. Woo hoo.
2010-02-02 02:38:39 +00:00
VariantFiltration.xml
Temporary solution: add the commons logging implementation to the VariantFiltration package. Downstream solution is described in GSA-262.
2010-01-23 01:46:18 +00:00
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