gatk-3.8/public/java/src/net/sf
Matt Hanna 3642a73c07 Performance improvements for dynamically merging BAMs in read walkers.
This change and my previous change have dropped runtime when dynamically merging 2k BAM files from 72.6min/1M reads to 46.8sec/1M reads.
Note that many of these changes are stopgaps -- the real problem is the way ReadWalkers interface with Picard, and I'll have to work with
Tim&Co to produce a more maintainable patch.
2011-12-16 09:37:44 -05:00
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picard Performance improvements for dynamically merging BAMs in read walkers. 2011-12-16 09:37:44 -05:00
samtools First pass of the asynchronous block loader. 2011-11-18 15:02:59 -05:00