gatk3的最后一个经典版本3.8

Eric Banks dbb69a1e10 Need to use ints for quals in HaplotypeScore instead of bytes because of overflow (they are summed when haplotypes are combined)		2013-01-16 22:33:16 -05:00
licensing	Cleaning CRLF terminations in the licenses	2013-01-10 17:06:29 -05:00
protected/java	Need to use ints for quals in HaplotypeScore instead of bytes because of overflow (they are summed when haplotypes are combined)	2013-01-16 22:33:16 -05:00
public	Bug fix for VariantsToVCF: old dbSNP files can have '-' as reference base and those records always need to be padded.	2013-01-16 16:15:58 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00