gatk3的最后一个经典版本3.8

Guillermo del Angel db92671b7f Merge branch 'master' of ssh://gsa4.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable		2012-08-15 13:32:07 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Expanded the BQSR reporting script	2012-08-12 13:45:14 -04:00
public	In AlleleCount stratification, check to make sure the AC (or MLEAC) is valid (i.e. not higher than number of chromosomes) and throw a User Error if it isn't. Added a test for bad AC.	2012-08-14 15:02:30 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Update cofoja version in build.xml	2012-08-09 17:08:43 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00