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gatk-3.8/public/java/test/org/broadinstitute/sting/gatk/walkers
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Mark DePristo 2874835997 Bug fix for type checking RodBindings 
Now compares the feature class not the codec class.
UnitTests improvements
integrationtests on their way to actually running
 		2011-08-02 22:25:41 -04:00
..
annotator Merge branch 'master' into rodRefactor 2011-08-02 14:21:58 -04:00
beagle --variants throughout integrationtests 2011-08-02 20:28:47 -04:00
coverage Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
diffengine Revert "Merge branch 'master' of ssh://gsa1/humgen/gsa-scr1/gsa-engineering/git/unstable" 2011-07-19 18:38:53 -04:00
fasta --variants throughout integrationtests 2011-08-02 20:28:47 -04:00
filters --variants throughout integrationtests 2011-08-02 20:28:47 -04:00
genotyper Merge branch 'master' into rodRefactor 2011-08-02 14:21:58 -04:00
indels Updating tools to use the RodBinding<T> syntax 2011-08-02 14:05:51 -04:00
phasing Updated MD5 for PhaseByTransmissionIntegrationTest 2011-07-26 17:52:25 -04:00
qc --variants throughout integrationtests 2011-08-02 20:28:47 -04:00
recalibration Updating tools to use the RodBinding<T> syntax 2011-08-02 14:05:51 -04:00
validation When using the BWA bindings, you have to explicitly call close() to get the 2011-07-21 12:13:29 -04:00
varianteval Merge branch 'master' into rodRefactor 2011-08-02 14:21:58 -04:00
variantrecalibration Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00
variantutils Bug fix for type checking RodBindings 2011-08-02 22:25:41 -04:00
BAQIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
ClipReadsWalkersIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PileupWalkerIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PrintReadsIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PrintReadsWalkerUnitTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00