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gatk-3.8/public/java/test/org/broadinstitute/sting/utils/recalibration
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Mauricio Carneiro 0f8c77391d BQSR bug triage #3 
* fixed context covariate famous "off by one" error
   * reduced maximum quality score to Q50 (following Eric/Ryan's suggestion)
   * remove context downsampling in BQSR R script
 		2012-04-19 17:31:04 -04:00
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BaseRecalibrationUnitTest.java BQSR bug triage #3 2012-04-19 17:31:04 -04:00