Karthik Gururaj e8a5022777 1. Added support for JNI integration for LoglessCaching PairHMM AVX ... implementation. 2. Contains lots of debug code 3. Only invokes JNI for subComputeReadLikelihoodGivenHaplotypeLog10		2014-01-15 11:07:09 -08:00
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src/org/broadinstitute/sting	1. Added support for JNI integration for LoglessCaching PairHMM AVX	2014-01-15 11:07:09 -08:00
test/org/broadinstitute/sting	Allow for additional input data to be used in the VQSR for clustering but don't carry it forward into the output VCF file.	2014-01-02 14:46:04 -05:00