Mauricio Carneiro 4f78025b0b Merged bug fix from Stable into Unstable		2011-07-22 14:42:04 -04:00
..
examples	moving the example scala scripts to the qscripts package.	2011-07-01 16:14:59 -04:00
lib	moving the example scala scripts to the qscripts package.	2011-07-01 16:14:59 -04:00
DataProcessingPipeline.scala	Resolving simple conflicts in the data processing pipeline.	2011-07-19 08:05:11 -04:00
GATKResourcesBundle.scala	* Added the decoy reference to the bundle under the b37 resources.	2011-07-22 14:41:22 -04:00
MethodsDevelopmentCallingPipeline.scala	Making the outputDir optional. Default = ./	2011-07-05 16:30:41 -04:00
RecalibrateBaseQualities.scala	Removed broad specific default paths so people from outside the broad can use it.	2011-07-18 23:25:21 -04:00
StandardVariantEvaluation.scala	new home for the core qscripts	2011-06-30 11:32:06 -04:00