gatk3的最后一个经典版本3.8

Mark DePristo d7a6cd99cd Expand intervals processed for many GATKPerformanceOverTime commands ... -- For the high NT tests the total runtime may be too short to really assess nt efficiency vs. start up costs. Reworked underlying test data and intervals so that most tests run in 10-20 hrs for -nt 1.		2012-08-22 16:48:01 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Merged bug fix from Stable into Unstable	2012-08-22 14:40:34 -04:00
public	Merge branch 'master' of ssh://gsa4.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2012-08-22 15:53:47 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Convert external.build.dir and external.dist.dir back to paths	2012-08-15 23:04:10 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00