depristo d6cbe4d0ad Bug fixes to support haploid genotypes, optimization for indexing, now tracks the line of the VCF and catches errors to tell you the line no and line when a parsing error occurred. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3646 348d0f76-0448-11de-a6fe-93d51630548a		2010-06-25 21:08:41 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org	Bug fixes to support haploid genotypes, optimization for indexing, now tracks the line of the VCF and catches errors to tell you the line no and line when a parsing error occurred.	2010-06-25 21:08:41 +00:00
test/org/broadinstitute/sting	The GT field once again reigns supreme (it must be the first genotype field). Thanks for the catch Eric.	2010-06-25 21:03:05 +00:00