Matt Hanna 3ba918aff1 Error message cleanup in BAM indexing code.		2012-01-17 11:05:42 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Error message cleanup in BAM indexing code.	2012-01-17 11:05:42 -05:00
test	Fixed NPE in getNextOverlappingBAMScheduleEntry() when mixed mapped/unmapped interval lists are used. Added integrationtest to verify behavior.	2012-01-12 13:29:11 -05:00