gatk3的最后一个经典版本3.8

David Roazen d4f873f664 Revert "github webhook handler: convert from daemon to cron job" ... Turns out the email script doesn't work correctly from cron. Converting the webhook script back to a daemon for now until it can be made to work as a cron job. This reverts commit 9679accb641537f5c637cce0aeb63f3925521b42.		2013-03-19 03:50:39 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Bug fix in assembly for edge case in which the extendPartialHaplotype function was filling in deletions in the middle of haplotypes.	2013-03-15 14:20:25 -04:00
public	fix typos in argument docs and in printed output in CoveredByNSamplesSites and rewrite an unaccurate comment	2013-03-18 13:54:21 -04:00
settings	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Fix tests that were consistently or intermittently failing when run in parallel on the farm	2013-03-06 13:56:54 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00