Mark DePristo b5fa848255 Fix GSA-515 Nanoscheduler GSA-573 -nt and -nct interact badly w.r.t. output ... -- See https://jira.broadinstitute.org/browse/GSA-573 -- Uses InheritedThreadLocal storage so that children threads created by the NanoScheduler see the parent stubs in the main thread. -- Added explicit integration test that checks that -nt 1, 2 and -nct 1, 2 give the same results for GLM BOTH with the UG over 1 MB.		2012-09-20 18:45:16 -04:00
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net/sf	Cleanup of VCF header lines and constants, BCF2 bugfixes	2012-06-21 15:16:31 -04:00
org/broadinstitute/sting	Fix GSA-515 Nanoscheduler GSA-573 -nt and -nct interact badly w.r.t. output	2012-09-20 18:45:16 -04:00