Mark DePristo d1ba17df5d Fixed nasty bug in BCF2 writer for case where all genotypes are missing ... -- Previous code was looking for a -1 result from maxPloidy() but the result as actually 0, so instead of writing a diploid no call we were actually writing "unavailable" genotypes, and failing the BCF == VCF test in integration tests. Fixed.		2012-09-12 06:46:27 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Fixed nasty bug in BCF2 writer for case where all genotypes are missing	2012-09-12 06:46:27 -04:00
test	VCF/BCF writers once again automatically write out no-call genotypes for samples in the VCFHeader but not in the VC itself	2012-09-12 06:46:26 -04:00