Khalid Shakir d1a689af33 Added new utility files used by maven build, including the ant-bridge script.		2014-02-03 13:50:46 -05:00
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c	At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.	2012-01-17 14:47:53 -05:00
chainFiles	…
doc	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
external-example/src	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00
gatk-framework/src	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00
gatk-package/src/main/assembly	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00
gatk-queue-extgen/src/main/java/org/broadinstitute/sting/queue/extensions/gatk	Moved gsalib, R and other resources, Queue GATK extensions generator, Queue version java files.	2014-02-03 13:49:21 -05:00
gsalib/src	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00
java/config	Moved files to maven directories.	2014-02-03 13:50:44 -05:00
perl	Fixing the liftover script to not require strict VCF header validation.	2013-11-07 09:02:17 -05:00
queue-framework/src	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00
queue-package/src/main/assembly	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00
repo	Switched commited dependency repository from ivy to maven.	2014-02-03 13:50:46 -05:00
sting-utils/src/main/config/org/broadinstitute/sting/utils/help	Added new utility files used by maven build, including the ant-bridge script.	2014-02-03 13:50:46 -05:00