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gatk-3.8/public/java/test/org/broadinstitute/variant/variantcontext
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David Roazen a536e1da84 Move some VCF/VariantContext methods back to the GATK based on feedback 
-Moved some of the more specialized / complex VariantContext and VCF utility
 methods back to the GATK.

-Due to this re-shuffling, was able to return things like the Pair class back
 to the GATK as well.
 		2013-01-29 16:56:55 -05:00
..
writer org.broadinstitute.variant refactor, part 2 2013-01-28 09:03:46 -05:00
AlleleUnitTest.java org.broadinstitute.variant refactor, part 2 2013-01-28 09:03:46 -05:00
GenotypeLikelihoodsUnitTest.java org.broadinstitute.variant refactor, part 2 2013-01-28 09:03:46 -05:00
GenotypeUnitTest.java org.broadinstitute.variant refactor, part 2 2013-01-28 09:03:46 -05:00
GenotypesContextUnitTest.java org.broadinstitute.variant refactor, part 2 2013-01-28 09:03:46 -05:00
VariantContextTestProvider.java Move some VCF/VariantContext methods back to the GATK based on feedback 2013-01-29 16:56:55 -05:00
VariantContextUnitTest.java Move some VCF/VariantContext methods back to the GATK based on feedback 2013-01-29 16:56:55 -05:00
VariantJEXLContextUnitTest.java org.broadinstitute.variant refactor, part 2 2013-01-28 09:03:46 -05:00