Christopher Hartl cf9b1d350a Some minor changes to in-process functions that nobody else uses. CGL now properly ignores no-calls for external VCFs.		2012-01-19 00:20:49 -05:00
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qscript/org/broadinstitute/sting/queue/qscripts	Replacing Mills file with new gold standard indel set in the resource bundle for release with v1.5	2012-01-17 15:02:45 -05:00
src/org/broadinstitute/sting/queue	Some minor changes to in-process functions that nobody else uses. CGL now properly ignores no-calls for external VCFs.	2012-01-19 00:20:49 -05:00
test/org/broadinstitute/sting/queue	No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice.	2012-01-08 12:11:55 -05:00