cf7afc1ad4
Problem ------- Diagnose targets was skipping intervals when they were not covered by any reads. Solution -------- Rework the interval iteration logic to output all intervals as they're skipped over by the traversal, as well as adding a loop on traversal done to finish outputting intervals past the coverage of teh BAM file. Summarized Changes ------------------ * Outputs all intervals it iterates over, even if uncovered * Outputs leftover intervals in the end of the traversal * Updated integration tests [fixes #47813825] |
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