gatk-3.8/public/java
Christopher Hartl cf3e826a69 1) RFCombine switched to the new ROD system
2) TreeReduce added to useful RODWalkers, but doesn't help very much due to scaling problems
3) RFA refactored, and a genotype-free calculation model added to calculate skew in a genotype-free way (still needs generalization to any ploidy)
4) Added walker to genotype intron loss events, calls into the UG engine to do so. This is very much a first-pass walker.
5) Documentation added for ValidationAmplicons
2011-08-15 16:37:31 -04:00
..
config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src 1) RFCombine switched to the new ROD system 2011-08-15 16:37:31 -04:00
test Removed a public -> private dependency in our test suite. 2011-08-12 17:29:10 -04:00