gatk3的最后一个经典版本3.8

Christopher Hartl cf3e826a69 1) RFCombine switched to the new ROD system ... 2) TreeReduce added to useful RODWalkers, but doesn't help very much due to scaling problems 3) RFA refactored, and a genotype-free calculation model added to calculate skew in a genotype-free way (still needs generalization to any ploidy) 4) Added walker to genotype intron loss events, calls into the UG engine to do so. This is very much a first-pass walker. 5) Documentation added for ValidationAmplicons		2011-08-15 16:37:31 -04:00
public	1) RFCombine switched to the new ROD system	2011-08-15 16:37:31 -04:00
settings	The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml	2011-08-11 16:38:29 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Fixing the javadoc/scaladoc targets in build.xml	2011-08-11 19:24:41 -04:00
ivy.xml	The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml	2011-08-11 16:38:29 -04:00