Eric Banks 574d5b467f Bug fix for indel HMM: protect against situation where long reads (e.g. Sanger) in a pileup can lead to a read starting after the haplotype end for a given haplotype.		2012-12-09 02:09:34 -05:00
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gatk	Bug fix for indel HMM: protect against situation where long reads (e.g. Sanger) in a pileup can lead to a read starting after the haplotype end for a given haplotype.	2012-12-09 02:09:34 -05:00
utils	Do not let reduced reads get removed in the contamination down-sampling	2012-10-26 02:13:04 -04:00
package-info.java	build system overhaul	2012-05-17 15:16:29 -04:00