hanna ce38fa7c81 Breaking the signed int glass ceiling; stage 1: convert critical ints to longs. Code cleanup and documentation. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1852 348d0f76-0448-11de-a6fe-93d51630548a		2009-10-15 15:28:56 +00:00
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bwa	Breaking the signed int glass ceiling; stage 1: convert critical ints to longs. Code cleanup and documentation.	2009-10-15 15:28:56 +00:00
Aligner.java	Unidirectional alignments with mismatches now working. Significant refactoring will be required.	2009-09-22 19:05:10 +00:00
Alignment.java	Breaking the signed int glass ceiling; stage 1: convert critical ints to longs. Code cleanup and documentation.	2009-10-15 15:28:56 +00:00