gatk-3.8/scala/qscript/oneoffs
carneiro c7a51f0de7 fixed 1kg pilot dindel calls vcf file and combined all vcfs into one master dindel file.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5335 348d0f76-0448-11de-a6fe-93d51630548a
2011-02-28 19:04:58 +00:00
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carneiro fixed 1kg pilot dindel calls vcf file and combined all vcfs into one master dindel file. 2011-02-28 19:04:58 +00:00
chartl Fixing import GenotypeCalculationModel since it doesn't exist anymore. 2011-02-02 15:39:43 +00:00
delangel Script for calling indels in all phase 1 samples - VQSR part still needs work but raw calling is done 2011-01-22 14:07:10 +00:00
depristo Class name to reflect actual file name. manySampleUGPerformance now operates on 1000 samples! 2011-02-26 23:36:04 +00:00
fromer Added GC content calculator for CNV data 2011-02-14 22:29:55 +00:00
hanna Refactoring the qscript directory; oneoffs, playground, and core 2011-01-19 15:23:40 +00:00
kshakir Removed deprecated getDbsnpFile. 2011-02-08 21:12:15 +00:00
rpoplin Following Ryan's suggestion, I am moving the Methods Development Calling pipeline to the Core. 2011-02-10 17:36:05 +00:00
QTools.q Fix expand intervals to do the right thing: 2011-02-26 04:19:01 +00:00