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gatk-3.8/public/java/test/org/broadinstitute/sting/gatk
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Mark DePristo ccedd6ff4c Difference is now the general form -- used to be SummarizedDifference. The old Difference class is now a subclass of Difference that includes pointers to specific the master and test DiffElements. 
Added a size() function that calculates the number of elements tree from a DiffElement.
 		2011-07-12 15:20:28 -04:00
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arguments Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
datasources Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
executive Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
filters Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
iterators Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
refdata Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
report Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
traversals Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
walkers Difference is now the general form -- used to be SummarizedDifference. The old Difference class is now a subclass of Difference that includes pointers to specific the master and test DiffElements. 2011-07-12 15:20:28 -04:00
GenomeAnalysisEngineUnitTest.java Fixing broken paths to the testdata directory throughout the codebase. 2011-06-29 17:36:47 -04:00
WalkerManagerUnitTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00