gatk3的最后一个经典版本3.8

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kshakir cca3d167db Merge pull request #627 from broadinstitute/ks_picard_htsjdk_package_rename picard/htsjdk package rename		2014-05-08 13:12:22 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Java/Scala imports updated for new package names.	2014-05-08 19:13:31 +08:00
public	Java/Scala imports updated for new package names.	2014-05-08 19:13:31 +08:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests	2014-03-10 21:24:03 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Quoting -out parameter during resource bundle (StingText.properties) creation.	2014-04-15 17:06:49 +08:00

The Genome Analysis Toolkit