Eric Banks 481982202d Fixing the failing RR integration tests. ... * After consulting Tim/David/Mauricio we determined that the md5 changes were due to different encodings of binary arrays in samjdk * However, it made no functional difference to the results (confirmed by Eric) so we agreed to update md5s * Also, the header of one of the test bams was malformed but old picard jar didn't perform checks so it only started failing now * Fixed the bam		2013-02-06 12:40:56 -05:00
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src/org/broadinstitute/sting	Fast path for biallelic variants in IndependentAllelesDiploidExactAFCalc	2013-02-06 10:34:09 -05:00
test/org/broadinstitute/sting	Fixing the failing RR integration tests.	2013-02-06 12:40:56 -05:00