Mark DePristo be66049a6f Bugfix for CommonSuffixSplitter ... -- The problem is that the common suffix splitter could eliminate the reference source vertex when there's an incoming node that contains all of the reference source vertex bases and then some additional prefix bases. In this case we'd eliminate the reference source vertex. Fixed by checking for this condition and aborting the simplification -- Update MD5s, including minor improvements		2013-04-21 19:37:01 -04:00
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gatk/walkers	Bugfix for CommonSuffixSplitter	2013-04-21 19:37:01 -04:00
utils	Select the haplotypes we move forward for genotyping per sample, not pooled	2013-04-16 09:42:03 -04:00