gatk-3.8/java/test/org/broadinstitute/sting/gatk/walkers
depristo 721e8cb679 VariantsToTable now supports wildcard captures. -F PREFIX* now captures all fields that begin with PREFIX, output as a comma-separated list of unique values. Added integration test for VariantsToTable since I find it so useful.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4706 348d0f76-0448-11de-a6fe-93d51630548a
2010-11-18 18:54:59 +00:00
..
annotator When you commit code late at night you tend to make careless mistakes... like forgetting to update integration tests. 2010-11-12 14:41:10 +00:00
beagle When you commit code late at night you tend to make careless mistakes... like forgetting to update integration tests. 2010-11-12 14:41:10 +00:00
coverage Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
fasta Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
filters Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
genotyper Better precision for the calculated AF value. Now looks at the total number of samples to determine how much precision is necessary. Also, changing default min BQ used for calling in UGv2 to Q17. 2010-11-12 08:31:40 +00:00
indels Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
phasing Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
qc Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
recalibration Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
sequenom Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
varianteval Passing ReviewedStingExceptions through the HMS. 2010-11-16 21:50:42 +00:00
variantrecalibration - Reintroduce test dependency so that the tests passing / failing is not 2010-11-16 19:55:20 +00:00
variantutils VariantsToTable now supports wildcard captures. -F PREFIX* now captures all fields that begin with PREFIX, output as a comma-separated list of unique values. Added integration test for VariantsToTable since I find it so useful. 2010-11-18 18:54:59 +00:00
ClipReadsWalkersIntegrationTest.java Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
PileupWalkerIntegrationTest.java Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
PrintReadsWalkerUnitTest.java Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
VariantsToVCFIntegrationTest.java Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00