gatk-3.8/java/src/org/broadinstitute/sting/gatk/iterators
aaron e5c80e59dc fixed the case when you're not seeking, it didn't initalize
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@456 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-16 22:16:03 +00:00
..
BoundedReadIterator.java Adding an iterator that bounds the number of reads 2009-04-14 22:18:31 +00:00
BoundedReferenceIterator.java Moved fasta support files into their own package. 2009-04-14 18:13:23 +00:00
DownsampleIterator.java Added iterator to randomly downsample to a given fraction of the reads. 2009-04-01 02:11:13 +00:00
LocusIterator.java Push core / playground lower into the tree. 2009-03-23 23:19:54 +00:00
LocusIteratorByHanger.java Fixed potential bug with next() operation returning empty contexts when a read contains a large deletion. We can now use the look ahead safely... 2009-04-15 21:38:28 +00:00
MergingSamRecordIterator2.java fixed the case when you're not seeking, it didn't initalize 2009-04-16 22:16:03 +00:00
PushbackIterator.java Push core / playground lower into the tree. 2009-03-23 23:19:54 +00:00
ReferenceIterator.java Moved fasta support files into their own package. 2009-04-14 18:13:23 +00:00
SamQueryIterator.java Fixing problems with SAMQueryIterator and reads 2009-04-02 18:04:28 +00:00
SortSamIterator.java Uses the cleaner new GenomeLoc(read) syntax 2009-04-14 00:53:58 +00:00
ThreadedIterator.java Push core / playground lower into the tree. 2009-03-23 23:19:54 +00:00
VerifyingSamIterator.java Uses the cleaner new GenomeLoc(read) syntax 2009-04-14 00:53:58 +00:00