1358 lines
390 KiB
Plaintext
1358 lines
390 KiB
Plaintext
##fileformat=VCFv4.0
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##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth (only filtered reads used for calling)">
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##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality">
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##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
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##FORMAT=<ID=PL,Number=3,Type=Float,Description="Normalized, Phred-scaled likelihoods for AA,AB,BB genotypes where A=ref and B=alt; not applicable if site is not biallelic">
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##GenomicAnnotator="analysis_type=GenomicAnnotator input_file=[] sample_metadata=[] read_buffer_size=null phone_home=STANDARD read_filter=[] intervals=null excludeIntervals=null reference_sequence=/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta rodBind=[/humgen/gsa-hpprojects/GATK/data/Annotations/refseq/refGene-big-table-hg19.txt, FundamentalsTest.vcf] rodToIntervalTrackName=variant BTI_merge_rule=UNION DBSNP=null downsampling_type=null downsample_to_fraction=null downsample_to_coverage=null baq=OFF baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=1 interval_merging=ALL read_group_black_list=null processingTracker=null restartProcessingTracker=false processingTrackerStatusFile=null processingTrackerID=-1 allow_intervals_with_unindexed_bam=false logging_level=INFO log_to_file=null quiet_output_mode=false debug_mode=false help=false out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub vcfOutput=null sampleName=null oneToMany=false maxJoinTableSize=500000 ignoreFilteredSites=false"
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##INFO=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
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##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
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##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
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##INFO=<ID=DBSNP129,Number=0,Type=Flag,Description="DBSNP129 Membership">
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##INFO=<ID=DBSNP132,Number=0,Type=Flag,Description="DBSNP132 Membership">
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##INFO=<ID=GenericAnnotation,Number=1,Type=Integer,Description="For each variant in the 'variants' ROD, finds all entries in the other -B files that overlap the variant's position.">
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##INFO=<ID=HAPMAP,Number=0,Type=Flag,Description="HAPMAP Membership">
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##INFO=<ID=OMNI,Number=0,Type=Flag,Description="OMNI Membership">
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##SelectVariants="analysis_type=SelectVariants input_file=[] sample_metadata=[] read_buffer_size=null phone_home=STANDARD read_filter=[] intervals=[20:10000000-10100000] excludeIntervals=null reference_sequence=/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta rodBind=[/humgen/1kg/processing/release/phase1/chr20/ALL.phase1.chr20.broad.snps.genotypes.vcf] rodToIntervalTrackName=null BTI_merge_rule=UNION DBSNP=null downsampling_type=null downsample_to_fraction=null downsample_to_coverage=null baq=OFF baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=1 interval_merging=ALL read_group_black_list=null processingTracker=null restartProcessingTracker=false processingTrackerStatusFile=null processingTrackerID=-1 allow_intervals_with_unindexed_bam=false logging_level=INFO log_to_file=null quiet_output_mode=false debug_mode=false help=false out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sample=null select_expressions=[] excludeNonVariants=false excludeFiltered=false"
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##UGCallVariants="analysis_type=UGCallVariants input_file=[] sample_metadata=[] read_buffer_size=null phone_home=STANDARD read_filter=[] intervals=[/humgen/1kg/processing/allPopulations_chr20_phase1_release/perPop.calls.RELEASE/Q-31553@node1404-1-sg/temp-1/scatter.intervals] excludeIntervals=null reference_sequence=/humgen/1kg/reference/human_g1k_v37.fasta rodBind=[/humgen/gsa-hpprojects/GATK/data/dbsnp_132_b37.leftAligned.vcf, /humgen/1kg/processing/allPopulations_chr20_phase1_release/perPop.calls.RELEASE/ALL.phase1.chr20.raw.genotypes.vcf] rodToIntervalTrackName=null BTI_merge_rule=UNION DBSNP=null downsampling_type=null downsample_to_fraction=null downsample_to_coverage=50 baq=CALCULATE_AS_NECESSARY baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=1 interval_merging=ALL read_group_black_list=null processingTracker=null restartProcessingTracker=false processingTrackerStatusFile=null processingTrackerID=-1 logging_level=INFO log_to_file=null quiet_output_mode=false debug_mode=false help=false genotype_likelihoods_model=SNP p_nonref_model=EXACT heterozygosity=0.0010 pcr_error_rate=1.0E-4 genotype=false output_all_callable_bases=false standard_min_confidence_threshold_for_calling=0.0 standard_min_confidence_threshold_for_emitting=0.0 trigger_min_confidence_threshold_for_calling=30.0 trigger_min_confidence_threshold_for_emitting=30.0 noSLOD=true assume_single_sample_reads=null min_base_quality_score=17 min_mapping_quality_score=20 max_mismatches_in_40bp_window=3 use_reads_with_bad_mates=false max_deletion_fraction=0.05 get_indel_alleles_from_vcf=false min_indel_count_for_genotyping=5 indel_heterozygosity=1.25E-4 out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub"
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##VariantAnnotator="analysis_type=VariantAnnotator input_file=[] sample_metadata=[] read_buffer_size=null phone_home=STANDARD read_filter=[] intervals=null excludeIntervals=null reference_sequence=/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta rodBind=[/humgen/gsa-scr1/GATK_Data/dbsnp_129_b37.rod, /humgen/gsa-scr1/GATK_Data/dbsnp_132_b37.leftAligned.vcf, /humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/HapMap/3.3/genotypes_r27_nr.b37_fwd.vcf, /humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/Omni2.5_chip/1212samples.b37.vcf, FundamentalsTest.annotated.vcf] rodToIntervalTrackName=variant BTI_merge_rule=UNION DBSNP=null downsampling_type=null downsample_to_fraction=null downsample_to_coverage=null baq=OFF baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=1 interval_merging=ALL read_group_black_list=null processingTracker=null restartProcessingTracker=false processingTrackerStatusFile=null processingTrackerID=-1 allow_intervals_with_unindexed_bam=false logging_level=INFO log_to_file=null quiet_output_mode=false debug_mode=false help=false out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sampleName=null annotation=[] group=[] expression=[] useAllAnnotations=false list=false assume_single_sample_reads=null vcfContainsOnlyIndels=false"
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##source=SelectVariants
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#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT HG00513 NA12045 HG00625
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20 10000107 rs118109001 T . 165.79 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:4:12:0,12,140 0/0:2:6:0,6,71
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20 10000117 rs4816203 C T 84652.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:5:15:166,15,0 0/1:6:78:86,0,78 1/1:2:6:73,6,0
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20 10000211 rs4813908 C T 86562.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 1/1:3:9:109,9,0 0/1:4:21:102,0,21 1/1:3:9:111,9,0
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20 10000240 . C . 192.40 PASS AC=0;AF=0.00;AN=4;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,61 0/0:6:18:0,18,193 ./.
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20 10000365 . A . 90.83 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:5:15:0,15,174 0/0:2:6:0,6,76
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20 10000439 rs4816204 T G 94241.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 1/1:6:18:161,18,0 0/1:11:99:151,0,144 ./.
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20 10000534 rs73254316 T . 4699.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:4:12:0,12,133 0/0:3:9:0,9,111
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20 10000558 . G . 159.62 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,90 0/0:5:15:0,15,169 0/0:4:12:0,12,110
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20 10000598 rs6057087 T A 96540.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 1/1:3:9:94,9,0 0/1:6:52:52,0,125 1/1:3:9:110,9,0
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20 10000694 rs6057088 G A 49648.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 1/1:3:9:95,9,0 0/1:3:29:29,0,65 1/1:2:6:69,6,0
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20 10000758 rs6057089 T A 96805.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 1/1:2:6:74,6,0 0/1:4:22:22,0,94 1/1:1:3:38,3,0
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20 10001019 rs6077626 T G 30668.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:3:9:97,9,0 0/0:1:3:0,3,37 1/1:2:6:66,6,0
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20 10001027 . T . 9.95 PASS AC=0;AF=0.00;AN=6;DP=4 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:1:3:0,3,37 0/0:1:3:0,3,33
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20 10001298 rs1535165 T A 110579.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 1/1:6:18:209,18,0 0/0:2:6:0,6,63 1/1:2:6:76,6,0
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20 10001330 . C . 35.43 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,239 0/0:2:6:0,6,70 0/0:3:9:0,9,108
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20 10001357 . A . 27.87 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:4:12:0,12,135 0/0:3:9:0,9,108
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20 10001365 . C . 69.66 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:9:27:0,27,266 0/0:4:12:0,12,122 0/0:3:9:0,9,87
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20 10001366 . G . 128.76 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,200 0/0:3:9:0,9,88 0/0:3:9:0,9,88
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20 10001432 . A . 66.22 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:3:9:0,9,104 ./.
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20 10001440 . C . 59.74 PASS AC=0;AF=0.00;AN=2;DP=4 GT:DP:GQ:PL ./. 0/0:4:12:0,12,132 ./.
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20 10001474 rs1535166 C T 91680.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 1/1:10:30:338,30,0 0/1:4:22:22,0,80 1/1:1:3:38,3,0
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20 10001503 . G . 241.12 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:11:33:0,33,373 0/0:6:18:0,18,188 0/0:2:6:0,6,60
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20 10001564 . T . 79.64 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,243 0/0:6:18:0,18,205 0/0:3:9:0,9,107
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20 10001597 rs6077627 T C 23036.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/1:8:99:110,0,116 0/0:2:6:0,6,68 0/1:3:27:61,0,27
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20 10001604 . C . 111.63 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,233 0/0:3:9:0,9,106 0/0:3:9:0,9,97
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20 10001611 . G . 162.64 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:6:18:0,18,206 0/0:3:9:0,9,102 0/0:3:9:0,9,96
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20 10001617 rs2876191 C A 88706.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:7:21:244,21,0 0/1:3:24:24,0,61 1/1:1:3:32,3,0
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20 10001628 rs1535167 G A 115881.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:7:21:239,21,0 0/1:5:19:19,0,110 1/1:1:3:28,3,0
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20 10001661 rs1535168 T C 105118.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 1/1:7:21:226,21,0 0/1:9:97:97,0,133 ./.
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20 10001670 rs1535169 T G 110216.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:6:18:208,18,0 0/1:7:45:45,0,151 ./.
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20 10001885 rs78210943 C . 1003.29 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=19 GT:DP:GQ:PL 0/0:9:27:0,27,292 0/0:7:21:0,21,239 0/0:3:9:0,9,101
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20 10002022 . A . 263.64 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,213 0/0:3:9:0,9,105 0/0:5:15:0,15,188
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20 10002036 rs113127344 A . 930.36 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:4:12:0,12,142 0/0:4:12:0,12,136
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20 10002058 rs4404352 T G 110085.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP GT:DP:GQ:PL 1/1:4:12:136,12,0 0/1:4:20:20,0,85 1/1:3:9:94,9,0
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20 10002099 rs4555427 C . 12250.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:8:24:0,24,267 0/0:2:6:0,6,71
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20 10002138 rs4569544 C G 82332.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL ./. 0/1:6:49:49,0,122 1/1:1:3:38,3,0
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20 10002142 rs4417777 G C 84343.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL ./. 0/1:6:49:49,0,123 1/1:1:3:35,3,0
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20 10002203 rs8126216 T . 1087.24 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,51 0/0:2:6:0,6,76 0/0:1:3:0,3,32
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20 10002208 . G . 49.02 PASS AC=0;AF=0.00;AN=6;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:2:6:0,6,74 0/0:1:3:0,3,26
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20 10002572 . C . 37.02 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:3:9:0,9,94 ./.
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20 10002625 rs2144570 G T 90555.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 1/1:1:3:36,3,0 0/0:2:6:0,6,70 1/1:1:3:35,3,0
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20 10002662 . C . 520.40 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:2:6:0,6,57 0/0:2:6:0,6,70
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20 10002663 . G . 39.72 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,51 0/0:2:6:0,6,71 0/0:2:6:0,6,57
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20 10002773 . T . 819.34 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:4:12:0,12,140 0/0:2:6:0,6,71
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20 10002841 . T . 3.49 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:3:6:0,6,82 0/0:1:3:0,3,38
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20 10002886 . G . 78.63 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,187 0/0:4:12:0,12,130 0/0:1:3:0,3,36
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20 10003021 rs6057090 C T 110690.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:3:9:104,9,0 0/1:6:7:148,0,7 ./.
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20 10003126 . C . 3.90 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:4:12:0,12,140 ./.
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20 10003178 . C . 102.69 PASS AC=0;AF=0.00;AN=4;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,80 0/0:9:24:0,24,255 ./.
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20 10003242 rs80310511 C . 2739.57 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,95 0/0:10:27:0,27,304 ./.
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20 10003243 rs115393149 G . 138.50 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,86 0/0:10:27:0,27,273 ./.
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20 10003358 rs926982 A C 92318.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 1/1:1:3:34,3,0 0/1:5:51:51,0,95 1/1:1:3:27,3,0
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20 10003446 rs926983 G . 5876.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:5:15:0,15,184 0/0:1:3:0,3,35
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20 10003469 rs79960114 C . 382.44 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,91 0/0:8:24:0,24,241 0/0:1:3:0,3,34
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20 10003587 . A . 31.60 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,143 0/0:7:21:0,21,248 0/0:3:9:0,9,99
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20 10003645 . T . 62.59 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:5:15:0,15,177 0/0:1:3:0,3,38
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20 10003651 rs926984 T C 124146.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:1:3:34,3,0 0/1:4:22:22,0,99 1/1:1:3:36,3,0
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20 10003692 rs2064653 A G 119873.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:2:6:66,6,0 0/1:4:20:20,0,85 1/1:3:9:112,9,0
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20 10003727 . T . 254.46 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:7:21:0,21,248 0/0:3:9:0,9,111
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20 10003752 . G . 860.30 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:6:18:0,18,198 0/0:3:9:0,9,111
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20 10003759 rs12480670 C . 3042.99 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:4:12:0,12,136 0/0:3:9:0,9,104
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20 10003775 . C . 47.51 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:4:12:0,12,118 0/0:1:3:0,3,29
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20 10003785 . T . 22.84 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,76 0/0:8:21:0,21,246 ./.
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20 10003817 . A . 200.25 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:5:15:0,15,169 0/0:2:6:0,6,77
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20 10003832 rs6057091 G A 109679.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 1/1:2:6:64,6,0 0/1:3:25:25,0,54 1/1:2:6:75,6,0
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20 10004031 . G . 77.55 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:3:9:0,9,102 0/0:1:3:0,3,36
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20 10004047 . C . 29.14 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,160 0/0:4:12:0,12,119 0/0:1:3:0,3,37
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20 10004049 rs112115724 C . 9856.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,169 0/0:5:15:0,15,156 0/0:1:3:0,3,37
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20 10004094 rs1988590 A C 50440.04 PASS AC=2;AF=0.50;AN=4;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 1/1:1:3:30,3,0 0/0:3:9:0,9,98 ./.
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20 10004104 . C . 84.12 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:4:12:0,12,124 ./.
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20 10004125 . G . 91.91 PASS AC=0;AF=0.00;AN=4;DP=2 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:1:3:0,3,33 ./.
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20 10004147 rs1988591 A G 26035.04 PASS AC=2;AF=0.50;AN=4;DBSNP129;DBSNP132;DP=2 GT:DP:GQ:PL 1/1:1:3:26,3,0 0/0:1:3:0,3,35 ./.
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20 10004178 . C . 20.37 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL 0/0:2:6:0,6,60 0/0:1:3:0,3,26 ./.
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20 10004193 rs113552177 G . 202.95 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:3:9:0,9,91 0/0:1:3:0,3,33 ./.
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20 10004194 . C . 88.66 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:4:12:0,12,129 0/0:1:3:0,3,32 ./.
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20 10004200 . C . 14.94 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:4:12:0,12,131 0/0:1:3:0,3,23 ./.
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20 10004224 rs1988592 A . 869.55 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=2 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:1:3:0,3,30 ./.
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20 10004298 . G . 663.80 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,115 0/0:3:9:0,9,93 0/0:3:9:0,9,93
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20 10004351 rs6057092 C G 100560.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:5:15:161,15,0 0/0:5:15:0,15,174 1/1:3:9:109,9,0
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20 10004389 rs6057093 T G 98035.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 1/1:5:15:154,15,0 0/0:4:12:0,12,147 1/1:3:9:108,9,0
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20 10004457 . G . 95.98 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:5:15:0,15,173 0/0:1:3:0,3,37
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20 10004566 . C . 39.52 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,200 0/0:7:21:0,21,239 0/0:3:9:0,9,101
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20 10004606 rs7270213 C . 286.64 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:5:15:0,15,179 0/0:3:9:0,9,103
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20 10004610 rs2064654 A C 106121.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:4:12:138,12,0 0/1:4:24:24,0,100 1/1:3:9:110,9,0
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20 10004647 rs12480892 G . 375.19 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:6:18:0,18,199 0/0:7:21:0,21,238 0/0:4:12:0,12,135
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20 10004675 rs116863189 A G 567.89 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:6:18:0,18,218 0/1:8:38:182,0,38 0/0:3:9:0,9,112
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20 10004725 rs10485737 A G 28651.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=19;HAPMAP GT:DP:GQ:PL 0/0:8:24:0,24,282 0/1:8:78:78,0,139 0/0:3:9:0,9,111
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20 10004874 rs725567 A C 123268.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 1/1:2:6:69,6,0 0/1:8:99:106,0,109 1/1:3:9:106,9,0
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20 10004887 rs725566 A . 14740.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:7:21:0,21,239 0/0:3:9:0,9,108
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20 10004902 . C . 4.03 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,169 0/0:3:9:0,9,109
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20 10005010 rs725565 C T 114145.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP;OMNI GT:DP:GQ:PL 1/1:3:9:106,9,0 0/1:4:21:89,0,21 1/1:4:12:150,12,0
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20 10005114 . T . 71.11 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL 0/0:3:9:0,9,107 ./. 0/0:1:3:0,3,37
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20 10005116 rs112587879 A . 634.20 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:3:9:0,9,107 ./. 0/0:1:3:0,3,38
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20 10005179 . C . 51.39 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,200 0/0:3:9:0,9,99 0/0:4:12:0,12,144
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20 10005278 rs11697447 A . 1719.63 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:7:21:0,21,248 0/0:1:3:0,3,33 ./.
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20 10005427 rs6057094 C T 104986.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=14;OMNI GT:DP:GQ:PL 1/1:8:24:270,24,0 0/1:3:24:24,0,56 1/1:3:9:104,9,0
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20 10005465 rs6077630 G . 7339.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:4:12:0,12,123 0/0:4:12:0,12,139
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20 10005499 rs6077631 A G 103605.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=9;OMNI GT:DP:GQ:PL 1/1:4:12:130,12,0 1/1:1:3:32,3,0 1/1:4:12:137,12,0
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20 10005583 . C . 100.77 PASS AC=0;AF=0.00;AN=4;DP=13 GT:DP:GQ:PL 0/0:9:27:0,27,303 0/0:4:12:0,12,127 ./.
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20 10005587 rs6108375 A G 86087.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=14;OMNI GT:DP:GQ:PL 1/1:9:27:305,27,0 0/1:5:54:54,0,90 ./.
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20 10005696 . G . 268.21 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:10:30:0,30,322 0/0:4:12:0,12,133 0/0:3:9:0,9,108
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20 10005723 rs6108376 A G 103861.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=14;OMNI GT:DP:GQ:PL 1/1:9:27:276,27,0 1/1:4:12:109,12,0 1/1:1:3:34,3,0
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20 10005982 . G . 38.82 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:8:24:0,24,273 0/0:3:9:0,9,95 0/0:6:18:0,18,209
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20 10006191 . G . 9.49 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:2:6:0,6,71 0/0:7:21:0,21,229
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20 10006291 rs6118856 G A 50785.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=10;OMNI GT:DP:GQ:PL 0/1:3:24:61,0,24 0/1:4:52:59,0,52 0/1:3:23:23,0,65
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20 10006404 rs926985 A C 100506.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:6:18:200,18,0 0/1:3:28:60,0,28 1/1:2:6:75,6,0
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20 10006527 . G . 34.64 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:5:15:0,15,170 0/0:3:9:0,9,80
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20 10006548 rs115154521 C . 550.39 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,160 0/0:5:15:0,15,158 0/0:3:9:0,9,105
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20 10006568 . G . 5.58 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,27 0/0:3:9:0,9,81 0/0:2:6:0,6,62
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20 10006682 rs6057095 T A 96926.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 1/1:2:6:75,6,0 0/1:9:62:181,0,62 1/1:3:9:99,9,0
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20 10006688 . G . 42.38 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:8:24:0,24,238 0/0:3:9:0,9,89
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20 10006944 . G . 70.82 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:5:15:0,15,170 0/0:4:12:0,12,133
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20 10006969 . T . 18.63 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:2:6:0,6,74 0/0:7:21:0,21,250 0/0:5:15:0,15,186
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20 10006987 rs75824301 G . 1026.76 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:6:18:0,18,211 0/0:5:15:0,15,180
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20 10007043 rs78419965 G . 8331.04 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=6 GT:DP:GQ:PL ./. 0/0:5:15:0,15,158 0/0:1:3:0,3,30
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20 10007150 rs11904989 G . 10276.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:9:27:0,27,297 0/0:2:6:0,6,71
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20 10007175 rs2207850 C T 43081.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,67 0/1:10:99:148,0,142 0/1:3:20:20,0,56
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20 10007199 rs80245907 T . 49.76 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=7 GT:DP:GQ:PL ./. 0/0:5:15:0,15,168 0/0:2:6:0,6,73
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20 10007221 . C . 56.92 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:4:12:0,12,137 0/0:2:6:0,6,63
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20 10007352 rs1884399 C T 103122.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:2:6:71,6,0 0/1:5:56:92,0,56 1/1:2:6:74,6,0
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20 10007420 rs6118857 T . 6159.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:5:15:0,15,167 0/0:4:12:0,12,135
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20 10007429 rs6087105 G . 8212.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:4:12:0,12,134 0/0:2:6:0,6,74
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20 10007531 rs1884400 A G 113493.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 1/1:5:15:173,15,0 0/1:7:14:183,0,14 ./.
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20 10007575 rs6118858 C . 5105.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:5:15:0,15,154 ./.
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20 10007771 rs1884401 T . 17138.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8;OMNI GT:DP:GQ:PL 0/0:1:3:0,3,36 0/0:5:15:0,15,173 0/0:2:6:0,6,74
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20 10007800 . G . 58.83 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:5:15:0,15,176 0/0:3:9:0,9,99
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20 10007815 . T . 43 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,251 0/0:4:12:0,12,135 0/0:2:6:0,6,67
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20 10007835 rs7271000 T . 5878.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16;OMNI GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:6:18:0,18,207 0/0:3:9:0,9,113
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20 10007868 rs75256389 C . 732.62 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:7:21:0,21,242 0/0:2:6:0,6,71
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20 10007980 rs2876192 A C 97100.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 1/1:6:18:198,18,0 0/1:3:20:63,0,20 1/1:3:9:101,9,0
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20 10008122 . T . 38.18 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,142 0/0:7:21:0,21,229 0/0:1:3:0,3,37
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20 10008157 . A . 14.33 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:8:24:0,24,270 0/0:4:12:0,12,131 0/0:1:3:0,3,34
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20 10008198 rs76616290 T . 337.53 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:3:9:0,9,106 0/0:4:12:0,12,140
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20 10008221 rs2876193 T C 91631.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:5:12:140,12,0 0/1:4:59:60,0,59 1/1:4:12:142,12,0
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20 10008389 rs7271206 A . 6580.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:1:3:0,3,37 0/0:4:12:0,12,132 0/0:3:9:0,9,109
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20 10008458 rs6087107 T G 93249.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 1/1:4:12:133,12,0 1/1:2:6:72,6,0 1/1:2:6:74,6,0
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20 10008596 . T . 6.25 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:2:6:0,6,72 0/0:2:6:0,6,67
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20 10008643 rs6087108 A . 2943.96 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:1:3:0,3,28 0/0:1:3:0,3,38
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20 10008652 . C . 7.94 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL 0/0:2:6:0,6,49 ./. 0/0:1:3:0,3,32
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20 10008742 rs12479925 G . 2851.57 PASS AC=0;AF=0.00;AN=2;DBSNP129;DBSNP132;DP=1 GT:DP:GQ:PL 0/0:1:3:0,3,27 ./. ./.
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20 10008828 . A . 424.44 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL 0/0:1:3:0,3,36 0/0:2:6:0,6,66 ./.
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20 10009074 . T . 59.64 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL ./. 0/0:5:15:0,15,158 0/0:1:3:0,3,39
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20 10009078 . G . 81.60 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL ./. 0/0:4:12:0,12,142 0/0:1:3:0,3,38
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20 10009227 rs12481420 A . 13849.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;HAPMAP;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:5:15:0,15,185 0/0:3:9:0,9,107
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20 10009246 rs4574174 A G 104585.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 1/1:5:15:171,15,0 0/1:6:57:57,0,132 1/1:4:12:144,12,0
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20 10009279 . T . 7.20 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,143 0/0:7:21:0,21,233 0/0:3:9:0,9,101
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20 10009306 rs77377838 G . 74.36 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:7:21:0,21,239 0/0:3:9:0,9,106
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20 10009365 . A . 424.93 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:1:3:0,3,36 0/0:6:18:0,18,218 0/0:6:18:0,18,221
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20 10009400 rs6057096 T A 84290.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:2:6:71,6,0 0/1:7:80:80,0,120 1/1:4:12:150,12,0
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20 10009475 . C . 9.15 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:4:12:0,12,131 0/0:2:6:0,6,69
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20 10009512 rs6039657 C G 96790.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:3:9:102,9,0 0/1:4:59:59,0,61 1/1:2:6:71,6,0
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20 10009549 rs80075474 G . 92.09 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:4:12:0,12,142 0/0:3:9:0,9,97
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20 10009550 rs116746806 C . 137.41 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:4:12:0,12,140 0/0:2:6:0,6,69
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20 10009710 . T . 55.70 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:4:12:0,12,132 0/0:2:6:0,6,71
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20 10009719 rs6057097 A G 49855.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:3:9:91,9,0 0/1:5:15:15,0,128 1/1:1:3:34,3,0
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20 10009795 rs6118861 A G 69109.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 1/1:1:3:34,3,0 0/1:4:22:22,0,94 1/1:3:9:103,9,0
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20 10009840 rs6039658 A . 22.84 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:2:6:0,6,69 0/0:2:6:0,6,76
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20 10009844 rs6057098 G A 24477.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/1:2:22:22,0,29 0/0:2:6:0,6,66 0/1:2:21:21,0,28
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20 10010012 . G . 180.86 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:3:9:0,9,84 0/0:5:15:0,15,174
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20 10010146 rs76549617 T . 204.32 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:1:3:0,3,37 0/0:3:9:0,9,107 0/0:5:15:0,15,180
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20 10010393 rs513998 T . 13748.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=17;HAPMAP GT:DP:GQ:PL 0/0:3:9:0,9,111 0/0:4:12:0,12,136 0/0:10:30:0,30,367
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20 10010766 rs517531 T G 78069.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 1/1:6:18:174,18,0 0/1:2:24:24,0,31 1/1:7:21:219,21,0
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20 10010832 rs582827 T C 92813.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15;OMNI GT:DP:GQ:PL 1/1:3:9:103,9,0 0/1:5:55:90,0,55 1/1:7:21:244,21,0
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20 10010936 . C . 577.96 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,93 0/0:2:6:0,6,74 0/0:4:12:0,12,137
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20 10011075 rs6039659 C T 92396.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP;OMNI GT:DP:GQ:PL 1/1:4:12:146,12,0 0/1:4:53:62,0,53 1/1:7:21:258,21,0
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20 10011200 . C . 6.82 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:3:9:0,9,107 0/0:2:6:0,6,71
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20 10011229 . T . 639.57 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,245 0/0:4:12:0,12,142 0/0:2:6:0,6,66
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20 10011309 rs641722 T C 90256.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 1/1:3:9:93,9,0 0/1:3:27:49,0,27 1/1:1:3:27,3,0
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20 10011554 . A . 40.96 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:7:21:0,21,241 0/0:3:9:0,9,103 ./.
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20 10011646 . G . 8.36 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:7:21:0,21,231 0/0:2:6:0,6,69 ./.
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20 10011666 rs546821 C T 117999.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:7:21:243,21,0 0/0:2:6:0,6,66 1/1:2:6:76,6,0
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20 10011668 rs6039660 C . 17.74 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:8:24:0,24,266 0/0:2:6:0,6,64 0/0:1:3:0,3,38
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20 10011901 rs74478785 A . 462.85 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,245 0/0:5:12:0,12,139 ./.
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20 10011939 rs548863 C T 111539.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=9;HAPMAP GT:DP:GQ:PL 1/1:7:21:246,21,0 0/1:2:24:29,0,24 ./.
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20 10012254 . A . 215.98 PASS AC=0;AF=0.00;AN=2;DP=2 GT:DP:GQ:PL ./. 0/0:2:6:0,6,76 ./.
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20 10012281 . C . 195.87 PASS AC=0;AF=0.00;AN=2;DP=3 GT:DP:GQ:PL ./. 0/0:3:9:0,9,105 ./.
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20 10012362 rs574425 G T 19398.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:1:3:35,3,0 0/1:5:60:60,0,86 ./.
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20 10012372 rs113203022 G . 214.93 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:5:15:0,15,179 ./.
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20 10012384 rs7270107 T C 8866.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:1:3:22,3,0 0/1:5:55:55,0,92 ./.
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20 10012387 rs6057102 T C 10914.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:1:3:26,3,0 0/1:5:53:53,0,96 ./.
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20 10012413 . C . 38.53 PASS AC=0;AF=0.00;AN=2;DP=3 GT:DP:GQ:PL ./. 0/0:3:9:0,9,87 ./.
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20 10012479 rs575394 A G 11782.04 PASS AC=1;AF=0.50;AN=2;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL ./. 0/1:3:29:29,0,67 ./.
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20 10012498 rs657453 C G 8516.04 PASS AC=1;AF=0.50;AN=2;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL ./. 0/1:3:28:28,0,61 ./.
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20 10012518 rs657490 T C 13137.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 1/1:1:3:33,3,0 0/1:2:32:33,0,32 ./.
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20 10012521 rs6141099 C T 11047.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 1/1:1:3:33,3,0 0/1:2:31:33,0,31 ./.
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20 10012636 rs57357029 G . 1174.06 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:3:9:0,9,80 0/0:2:6:0,6,74 ./.
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20 10012645 . C . 175.86 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL 0/0:3:9:0,9,94 0/0:3:9:0,9,87 ./.
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20 10012714 rs577258 G C 31766.04 PASS AC=1;AF=0.50;AN=2;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL ./. 0/1:4:40:53,0,40 ./.
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20 10012751 rs577383 T C 31790.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 1/1:1:3:35,3,0 1/1:2:6:73,6,0 1/1:1:3:34,3,0
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20 10012924 rs116887584 C . 2051.21 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=2 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:1:3:0,3,27 ./.
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20 10012969 rs6118863 G . 3125.02 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,52 0/0:6:18:0,18,190 0/0:1:3:0,3,37
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20 10012997 rs6118864 C . 5087.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,102 0/0:2:6:0,6,70
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20 10013009 . T . 64.14 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,133 0/0:3:9:0,9,105 0/0:2:6:0,6,66
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20 10013053 . G . 148.33 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,139 0/0:1:3:0,3,27 0/0:2:6:0,6,52
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20 10013065 . G . 1818.01 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,142 0/0:1:3:0,3,27 0/0:2:6:0,6,56
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20 10013086 rs114145669 C . 1251.98 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:4:12:0,12,123 ./. 0/0:2:6:0,6,68
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20 10013119 rs670350 C . 13070.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:3:9:0,9,95 0/0:1:3:0,3,39 0/0:1:3:0,3,25
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20 10013173 . T . 137.94 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:2:6:0,6,69 0/0:1:3:0,3,38
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20 10013175 . C . 76.37 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,151 0/0:2:6:0,6,68 0/0:1:3:0,3,31
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20 10013318 . C . 262.20 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:5:15:0,15,159 0/0:1:3:0,3,32
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20 10013332 . G . 14.46 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:5:15:0,15,162 0/0:1:3:0,3,35
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20 10013368 . G . 22.74 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:2:6:0,6,66 0/0:2:6:0,6,68
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20 10013398 . A . 42.78 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:1:3:0,3,22 0/0:2:6:0,6,76
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20 10013423 . C . 436.61 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,125 0/0:4:12:0,12,130 0/0:2:6:0,6,54
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20 10013481 . T . 418.86 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:3:9:0,9,101 ./.
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20 10013574 rs6057108 G A 78293.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:6:18:204,18,0 0/1:4:21:21,0,87 1/1:3:9:106,9,0
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20 10013640 . C . 52.23 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:6:18:0,18,204 0/0:9:27:0,27,286 0/0:3:9:0,9,109
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20 10013732 . C . 211.67 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:2:6:0,6,65 0/0:5:15:0,15,175
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20 10013758 rs117447940 G . 84.89 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:8:24:0,24,269 0/0:5:15:0,15,165 0/0:5:15:0,15,175
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20 10014090 . T . 924.90 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,195 0/0:4:12:0,12,142 0/0:5:15:0,15,173
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20 10014301 rs117701053 T . 157.15 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:8:24:0,24,277 0/0:4:12:0,12,137 0/0:5:15:0,15,187
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20 10014380 . A . 16.85 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,109 0/0:3:9:0,9,110 0/0:1:3:0,3,38
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20 10014520 . T . 91.51 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,214 0/0:7:21:0,21,240 0/0:3:9:0,9,105
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20 10014651 . C . 317.12 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,163 0/0:3:9:0,9,95 0/0:2:6:0,6,68
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20 10014698 . G . 51.49 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,103 0/0:2:6:0,6,51
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20 10014764 . C . 60.88 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,216 0/0:3:9:0,9,92 0/0:3:9:0,9,104
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20 10014783 . A . 61.54 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,240 0/0:3:9:0,9,94 0/0:3:9:0,9,109
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20 10014835 . G . 38.87 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,87 0/0:2:6:0,6,61 0/0:4:12:0,12,121
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20 10014891 rs74455585 G . 7197.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,128 0/0:3:9:0,9,88 0/0:3:9:0,9,86
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20 10015059 . C . 142.79 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,83 0/0:6:18:0,18,189 ./.
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20 10015196 . G . 37.44 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:4:12:0,12,129 0/0:3:9:0,9,104
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20 10015347 rs116660727 G . 197.59 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:4:12:0,12,140 0/0:1:3:0,3,35
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20 10015559 rs59663877 A . 109.22 PASS AC=0;AF=0.00;AN=0;DBSNP129;DBSNP132;DP=0 GT:DP:PL ./. ./. ./.
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20 10015565 . A . 199.58 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10015577 . A . 37.41 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10015679 rs113024248 C . 2829.33 PASS AC=0;AF=0.00;AN=0;DBSNP132;DP=0;OMNI GT:DP:PL ./. ./. ./.
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20 10015729 rs12106132 C . 5277.04 PASS AC=0;AF=0.00;AN=2;DBSNP129;DBSNP132;DP=2;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.-361C>A;refseq.codingCoordStr_2=c.-297C>A;refseq.codingCoordStr_3=c.-361C>C;refseq.codingCoordStr_4=c.-297C>C;refseq.codingCoordStr_5=c.-361C>G;refseq.codingCoordStr_6=c.-297C>G;refseq.codingCoordStr_7=c.-361C>T;refseq.codingCoordStr_8=c.-297C>T;refseq.end_1=10015729;refseq.end_2=10015729;refseq.end_3=10015729;refseq.end_4=10015729;refseq.end_5=10015729;refseq.end_6=10015729;refseq.end_7=10015729;refseq.end_8=10015729;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=33;refseq.mrnaCoord_2=33;refseq.mrnaCoord_3=33;refseq.mrnaCoord_4=33;refseq.mrnaCoord_5=33;refseq.mrnaCoord_6=33;refseq.mrnaCoord_7=33;refseq.mrnaCoord_8=33;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr5;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.positionType_6=utr5;refseq.positionType_7=utr5;refseq.positionType_8=utr5;refseq.spliceDist_1=33;refseq.spliceDist_2=33;refseq.spliceDist_3=33;refseq.spliceDist_4=33;refseq.spliceDist_5=33;refseq.spliceDist_6=33;refseq.spliceDist_7=33;refseq.spliceDist_8=33;refseq.start_1=10015729;refseq.start_2=10015729;refseq.start_3=10015729;refseq.start_4=10015729;refseq.start_5=10015729;refseq.start_6=10015729;refseq.start_7=10015729;refseq.start_8=10015729;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL ./. 0/0:2:6:0,6,67 ./.
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20 10015761 rs12106014 T . 20244.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=2;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.-329T>A;refseq.codingCoordStr_2=c.-265T>A;refseq.codingCoordStr_3=c.-329T>C;refseq.codingCoordStr_4=c.-265T>C;refseq.codingCoordStr_5=c.-329T>G;refseq.codingCoordStr_6=c.-265T>G;refseq.codingCoordStr_7=c.-329T>T;refseq.codingCoordStr_8=c.-265T>T;refseq.end_1=10015761;refseq.end_2=10015761;refseq.end_3=10015761;refseq.end_4=10015761;refseq.end_5=10015761;refseq.end_6=10015761;refseq.end_7=10015761;refseq.end_8=10015761;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=65;refseq.mrnaCoord_2=65;refseq.mrnaCoord_3=65;refseq.mrnaCoord_4=65;refseq.mrnaCoord_5=65;refseq.mrnaCoord_6=65;refseq.mrnaCoord_7=65;refseq.mrnaCoord_8=65;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr5;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.positionType_6=utr5;refseq.positionType_7=utr5;refseq.positionType_8=utr5;refseq.spliceDist_1=65;refseq.spliceDist_2=65;refseq.spliceDist_3=65;refseq.spliceDist_4=65;refseq.spliceDist_5=65;refseq.spliceDist_6=65;refseq.spliceDist_7=65;refseq.spliceDist_8=65;refseq.start_1=10015761;refseq.start_2=10015761;refseq.start_3=10015761;refseq.start_4=10015761;refseq.start_5=10015761;refseq.start_6=10015761;refseq.start_7=10015761;refseq.start_8=10015761;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:1:3:0,3,23 0/0:1:3:0,3,33 ./.
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20 10015762 . A . 35.63 PASS AC=0;AF=0.00;AN=4;DP=2;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.-328A>A;refseq.codingCoordStr_2=c.-264A>A;refseq.codingCoordStr_3=c.-328A>C;refseq.codingCoordStr_4=c.-264A>C;refseq.codingCoordStr_5=c.-328A>G;refseq.codingCoordStr_6=c.-264A>G;refseq.codingCoordStr_7=c.-328A>T;refseq.codingCoordStr_8=c.-264A>T;refseq.end_1=10015762;refseq.end_2=10015762;refseq.end_3=10015762;refseq.end_4=10015762;refseq.end_5=10015762;refseq.end_6=10015762;refseq.end_7=10015762;refseq.end_8=10015762;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.haplotypeReference_3=A;refseq.haplotypeReference_4=A;refseq.haplotypeReference_5=A;refseq.haplotypeReference_6=A;refseq.haplotypeReference_7=A;refseq.haplotypeReference_8=A;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=66;refseq.mrnaCoord_2=66;refseq.mrnaCoord_3=66;refseq.mrnaCoord_4=66;refseq.mrnaCoord_5=66;refseq.mrnaCoord_6=66;refseq.mrnaCoord_7=66;refseq.mrnaCoord_8=66;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr5;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.positionType_6=utr5;refseq.positionType_7=utr5;refseq.positionType_8=utr5;refseq.spliceDist_1=66;refseq.spliceDist_2=66;refseq.spliceDist_3=66;refseq.spliceDist_4=66;refseq.spliceDist_5=66;refseq.spliceDist_6=66;refseq.spliceDist_7=66;refseq.spliceDist_8=66;refseq.start_1=10015762;refseq.start_2=10015762;refseq.start_3=10015762;refseq.start_4=10015762;refseq.start_5=10015762;refseq.start_6=10015762;refseq.start_7=10015762;refseq.start_8=10015762;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.uorfChange_5=+1;refseq.uorfChange_6=+1 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:1:3:0,3,33 ./.
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20 10015790 rs114356776 G . 43.60 PASS AC=0;AF=0.00;AN=0;DBSNP132;DP=0;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.-300G>A;refseq.codingCoordStr_2=c.-236G>A;refseq.codingCoordStr_3=c.-300G>C;refseq.codingCoordStr_4=c.-236G>C;refseq.codingCoordStr_5=c.-300G>G;refseq.codingCoordStr_6=c.-236G>G;refseq.codingCoordStr_7=c.-300G>T;refseq.codingCoordStr_8=c.-236G>T;refseq.end_1=10015790;refseq.end_2=10015790;refseq.end_3=10015790;refseq.end_4=10015790;refseq.end_5=10015790;refseq.end_6=10015790;refseq.end_7=10015790;refseq.end_8=10015790;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=94;refseq.mrnaCoord_2=94;refseq.mrnaCoord_3=94;refseq.mrnaCoord_4=94;refseq.mrnaCoord_5=94;refseq.mrnaCoord_6=94;refseq.mrnaCoord_7=94;refseq.mrnaCoord_8=94;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr5;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.positionType_6=utr5;refseq.positionType_7=utr5;refseq.positionType_8=utr5;refseq.spliceDist_1=94;refseq.spliceDist_2=94;refseq.spliceDist_3=94;refseq.spliceDist_4=94;refseq.spliceDist_5=94;refseq.spliceDist_6=94;refseq.spliceDist_7=94;refseq.spliceDist_8=94;refseq.start_1=10015790;refseq.start_2=10015790;refseq.start_3=10015790;refseq.start_4=10015790;refseq.start_5=10015790;refseq.start_6=10015790;refseq.start_7=10015790;refseq.start_8=10015790;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:PL ./. ./. ./.
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20 10015965 . G . 25.89 PASS AC=0;AF=0.00;AN=6;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.-125G>A;refseq.codingCoordStr_2=c.-61G>A;refseq.codingCoordStr_3=c.-125G>C;refseq.codingCoordStr_4=c.-61G>C;refseq.codingCoordStr_5=c.-125G>G;refseq.codingCoordStr_6=c.-61G>G;refseq.codingCoordStr_7=c.-125G>T;refseq.codingCoordStr_8=c.-61G>T;refseq.end_1=10015965;refseq.end_2=10015965;refseq.end_3=10015965;refseq.end_4=10015965;refseq.end_5=10015965;refseq.end_6=10015965;refseq.end_7=10015965;refseq.end_8=10015965;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=269;refseq.mrnaCoord_2=269;refseq.mrnaCoord_3=269;refseq.mrnaCoord_4=269;refseq.mrnaCoord_5=269;refseq.mrnaCoord_6=269;refseq.mrnaCoord_7=269;refseq.mrnaCoord_8=269;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr5;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.positionType_6=utr5;refseq.positionType_7=utr5;refseq.positionType_8=utr5;refseq.spliceDist_1=-17;refseq.spliceDist_2=-17;refseq.spliceDist_3=-17;refseq.spliceDist_4=-17;refseq.spliceDist_5=-17;refseq.spliceDist_6=-17;refseq.spliceDist_7=-17;refseq.spliceDist_8=-17;refseq.start_1=10015965;refseq.start_2=10015965;refseq.start_3=10015965;refseq.start_4=10015965;refseq.start_5=10015965;refseq.start_6=10015965;refseq.start_7=10015965;refseq.start_8=10015965;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:3:9:0,9,79 0/0:7:18:0,18,183 0/0:2:6:0,6,57
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20 10015970 rs77182646 G . 507.22 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.-120G>A;refseq.codingCoordStr_2=c.-56G>A;refseq.codingCoordStr_3=c.-120G>C;refseq.codingCoordStr_4=c.-56G>C;refseq.codingCoordStr_5=c.-120G>G;refseq.codingCoordStr_6=c.-56G>G;refseq.codingCoordStr_7=c.-120G>T;refseq.codingCoordStr_8=c.-56G>T;refseq.end_1=10015970;refseq.end_2=10015970;refseq.end_3=10015970;refseq.end_4=10015970;refseq.end_5=10015970;refseq.end_6=10015970;refseq.end_7=10015970;refseq.end_8=10015970;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=274;refseq.mrnaCoord_2=274;refseq.mrnaCoord_3=274;refseq.mrnaCoord_4=274;refseq.mrnaCoord_5=274;refseq.mrnaCoord_6=274;refseq.mrnaCoord_7=274;refseq.mrnaCoord_8=274;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr5;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.positionType_6=utr5;refseq.positionType_7=utr5;refseq.positionType_8=utr5;refseq.spliceDist_1=-12;refseq.spliceDist_2=-12;refseq.spliceDist_3=-12;refseq.spliceDist_4=-12;refseq.spliceDist_5=-12;refseq.spliceDist_6=-12;refseq.spliceDist_7=-12;refseq.spliceDist_8=-12;refseq.start_1=10015970;refseq.start_2=10015970;refseq.start_3=10015970;refseq.start_4=10015970;refseq.start_5=10015970;refseq.start_6=10015970;refseq.start_7=10015970;refseq.start_8=10015970;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:7:18:0,18,208 0/0:2:6:0,6,73
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20 10016021 rs6133785 C G 20306.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=14;HAPMAP;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10016216;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10015992;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 1/1:3:9:102,9,0 0/0:10:27:0,27,299 1/1:1:3:24,3,0
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20 10016175 rs41275624 G . 4619.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10016216;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10015992;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:7:21:0,21,232 0/0:3:9:0,9,111
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20 10016207 rs6057110 C . 25344.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16;HAPMAP;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10016216;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10015992;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:7:18:0,18,212 0/0:4:12:0,12,120
|
|
20 10016271 . G . 65.23 PASS AC=0;AF=0.00;AN=6;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.codingCoordStr_2=c.-64G>A;refseq.codingCoordStr_3=c.-64G>C;refseq.codingCoordStr_4=c.-64G>G;refseq.codingCoordStr_5=c.-64G>T;refseq.end_1=10018895;refseq.end_2=10016271;refseq.end_3=10016271;refseq.end_4=10016271;refseq.end_5=10016271;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=G;refseq.haplotypeAlternate_5=T;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.mrnaCoord_2=330;refseq.mrnaCoord_3=330;refseq.mrnaCoord_4=330;refseq.mrnaCoord_5=330;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.name_3=NM_022096;refseq.name_4=NM_022096;refseq.name_5=NM_022096;refseq.numMatchingRecords=5;refseq.positionType_1=intron;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.spliceDist_2=-20;refseq.spliceDist_3=-20;refseq.spliceDist_4=-20;refseq.spliceDist_5=-20;refseq.start_1=10015992;refseq.start_2=10016271;refseq.start_3=10016271;refseq.start_4=10016271;refseq.start_5=10016271;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+ GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:6:18:0,18,200 0/0:2:6:0,6,70
|
|
20 10016279 . G . 488.86 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.codingCoordStr_2=c.-56G>A;refseq.codingCoordStr_3=c.-56G>C;refseq.codingCoordStr_4=c.-56G>G;refseq.codingCoordStr_5=c.-56G>T;refseq.end_1=10018895;refseq.end_2=10016279;refseq.end_3=10016279;refseq.end_4=10016279;refseq.end_5=10016279;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=G;refseq.haplotypeAlternate_5=T;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.mrnaCoord_2=338;refseq.mrnaCoord_3=338;refseq.mrnaCoord_4=338;refseq.mrnaCoord_5=338;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.name_3=NM_022096;refseq.name_4=NM_022096;refseq.name_5=NM_022096;refseq.numMatchingRecords=5;refseq.positionType_1=intron;refseq.positionType_2=utr5;refseq.positionType_3=utr5;refseq.positionType_4=utr5;refseq.positionType_5=utr5;refseq.spliceDist_2=-12;refseq.spliceDist_3=-12;refseq.spliceDist_4=-12;refseq.spliceDist_5=-12;refseq.start_1=10015992;refseq.start_2=10016279;refseq.start_3=10016279;refseq.start_4=10016279;refseq.start_5=10016279;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.uorfChange_5=+1 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:6:18:0,18,200 0/0:2:6:0,6,65
|
|
20 10016434 rs78133973 C . 1058.10 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,131 0/0:4:12:0,12,130 0/0:4:12:0,12,124
|
|
20 10016567 . C . 62.85 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,207 0/0:2:6:0,6,69 0/0:1:3:0,3,32
|
|
20 10016680 . C . 131.68 PASS AC=0;AF=0.00;AN=4;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,166 ./.
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|
20 10016744 . G . 63.68 PASS AC=0;AF=0.00;AN=4;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:7:21:0,21,238 ./.
|
|
20 10017162 . G . 404.88 PASS AC=0;AF=0.00;AN=4;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL ./. 0/0:9:24:0,24,280 0/0:1:3:0,3,34
|
|
20 10017218 . G . 52.75 PASS AC=0;AF=0.00;AN=4;DP=4;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,28 0/0:3:9:0,9,109 ./.
|
|
20 10017260 . C . 8.76 PASS AC=0;AF=0.00;AN=6;DP=5;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,27 0/0:3:9:0,9,94 0/0:1:3:0,3,25
|
|
20 10017287 . C . 594.35 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:6:18:0,18,208 0/0:1:3:0,3,37
|
|
20 10017405 . G . 369.33 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,88 0/0:4:12:0,12,132 0/0:1:3:0,3,31
|
|
20 10017496 . G . 225.99 PASS AC=0;AF=0.00;AN=6;DP=7;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,86 0/0:3:9:0,9,97 0/0:1:3:0,3,28
|
|
20 10017709 rs79343916 C . 1224.67 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:6:18:0,18,196 ./.
|
|
20 10017776 rs60127453 A . 9500.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:10:30:0,30,347 ./.
|
|
20 10017988 . C . 54.94 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,90 0/0:4:12:0,12,128 0/0:2:6:0,6,62
|
|
20 10018131 rs116515041 C . 237.07 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,165 0/0:7:18:0,18,214 0/0:2:6:0,6,65
|
|
20 10018158 rs512313 G C 61466.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:2:18:18,0,28 0/0:6:15:0,15,178 ./.
|
|
20 10018387 rs114852035 C . 458.56 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:11:33:0,33,386 0/0:2:6:0,6,70
|
|
20 10018401 . A . 36.12 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:12:36:0,36,420 0/0:4:12:0,12,146
|
|
20 10018555 rs570855 G . 23603.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=21;HAPMAP;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:11:33:0,33,375 0/0:7:21:0,21,253
|
|
20 10018632 . A . 64.17 PASS AC=0;AF=0.00;AN=6;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:8:24:0,24,280 0/0:5:15:0,15,181
|
|
20 10018670 rs115991176 A . 82.32 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,146 0/0:9:27:0,27,304 0/0:3:9:0,9,112
|
|
20 10018710 . T . 198.69 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:3:9:0,9,96 0/0:4:12:0,12,150
|
|
20 10018775 . A . 44.89 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:5:15:0,15,161 0/0:4:12:0,12,145
|
|
20 10018812 rs79678569 C . 570.68 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL ./. 0/0:4:12:0,12,132 0/0:5:15:0,15,163
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|
20 10018815 rs76711785 T . 564.61 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10018895;refseq.end_2=10018895;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_198798;refseq.name_2=NM_022096;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10015992;refseq.start_2=10016301;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:5:15:0,15,178 0/0:6:18:0,18,225
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|
20 10019093 rs575534 A G 69795.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=14;OMNI;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.chr_1=20;refseq.chr_2=20;refseq.codingCoordStr_1=c.144A>G;refseq.codingCoordStr_2=c.144A>G;refseq.codonCoord_1=48;refseq.codonCoord_2=48;refseq.end_1=10019093;refseq.end_2=10019093;refseq.frame_1=2;refseq.frame_2=2;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.haplotypeAlternate_1=G;refseq.haplotypeAlternate_2=G;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.mrnaCoord_1=537;refseq.mrnaCoord_2=473;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.proteinCoordStr_1=p.G48G;refseq.proteinCoordStr_2=p.G48G;refseq.referenceAA_1=Gly;refseq.referenceAA_2=Gly;refseq.referenceCodon_1=GGA;refseq.referenceCodon_2=GGA;refseq.spliceDist_1=188;refseq.spliceDist_2=188;refseq.start_1=10019093;refseq.start_2=10019093;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.variantAA_1=Gly;refseq.variantAA_2=Gly;refseq.variantCodon_1=GGG;refseq.variantCodon_2=GGG GT:DP:GQ:PL 0/1:3:24:24,0,60 0/0:6:18:0,18,211 1/1:5:15:172,15,0
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20 10019169 rs7260784 C . 1193.61 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14;HAPMAP;OMNI;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.220C>A;refseq.codingCoordStr_2=c.220C>A;refseq.codingCoordStr_3=c.220C>C;refseq.codingCoordStr_4=c.220C>C;refseq.codingCoordStr_5=c.220C>G;refseq.codingCoordStr_6=c.220C>G;refseq.codingCoordStr_7=c.220C>T;refseq.codingCoordStr_8=c.220C>T;refseq.codonCoord_1=74;refseq.codonCoord_2=74;refseq.codonCoord_3=74;refseq.codonCoord_4=74;refseq.codonCoord_5=74;refseq.codonCoord_6=74;refseq.codonCoord_7=74;refseq.codonCoord_8=74;refseq.end_1=10019169;refseq.end_2=10019169;refseq.end_3=10019169;refseq.end_4=10019169;refseq.end_5=10019169;refseq.end_6=10019169;refseq.end_7=10019169;refseq.end_8=10019169;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=613;refseq.mrnaCoord_2=549;refseq.mrnaCoord_3=613;refseq.mrnaCoord_4=549;refseq.mrnaCoord_5=613;refseq.mrnaCoord_6=549;refseq.mrnaCoord_7=613;refseq.mrnaCoord_8=549;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.P74T;refseq.proteinCoordStr_2=p.P74T;refseq.proteinCoordStr_3=p.P74P;refseq.proteinCoordStr_4=p.P74P;refseq.proteinCoordStr_5=p.P74A;refseq.proteinCoordStr_6=p.P74A;refseq.proteinCoordStr_7=p.P74S;refseq.proteinCoordStr_8=p.P74S;refseq.referenceAA_1=Pro;refseq.referenceAA_2=Pro;refseq.referenceAA_3=Pro;refseq.referenceAA_4=Pro;refseq.referenceAA_5=Pro;refseq.referenceAA_6=Pro;refseq.referenceAA_7=Pro;refseq.referenceAA_8=Pro;refseq.referenceCodon_1=CCT;refseq.referenceCodon_2=CCT;refseq.referenceCodon_3=CCT;refseq.referenceCodon_4=CCT;refseq.referenceCodon_5=CCT;refseq.referenceCodon_6=CCT;refseq.referenceCodon_7=CCT;refseq.referenceCodon_8=CCT;refseq.spliceDist_1=-127;refseq.spliceDist_2=-127;refseq.spliceDist_3=-127;refseq.spliceDist_4=-127;refseq.spliceDist_5=-127;refseq.spliceDist_6=-127;refseq.spliceDist_7=-127;refseq.spliceDist_8=-127;refseq.start_1=10019169;refseq.start_2=10019169;refseq.start_3=10019169;refseq.start_4=10019169;refseq.start_5=10019169;refseq.start_6=10019169;refseq.start_7=10019169;refseq.start_8=10019169;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Thr;refseq.variantAA_2=Thr;refseq.variantAA_3=Pro;refseq.variantAA_4=Pro;refseq.variantAA_5=Ala;refseq.variantAA_6=Ala;refseq.variantAA_7=Ser;refseq.variantAA_8=Ser;refseq.variantCodon_1=ACT;refseq.variantCodon_2=ACT;refseq.variantCodon_3=CCT;refseq.variantCodon_4=CCT;refseq.variantCodon_5=GCT;refseq.variantCodon_6=GCT;refseq.variantCodon_7=TCT;refseq.variantCodon_8=TCT GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:6:18:0,18,211 0/0:4:12:0,12,144
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|
20 10019244 rs114094702 A . 207.13 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=21;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.295A>A;refseq.codingCoordStr_2=c.295A>A;refseq.codingCoordStr_3=c.295A>C;refseq.codingCoordStr_4=c.295A>C;refseq.codingCoordStr_5=c.295A>G;refseq.codingCoordStr_6=c.295A>G;refseq.codingCoordStr_7=c.295A>T;refseq.codingCoordStr_8=c.295A>T;refseq.codonCoord_1=99;refseq.codonCoord_2=99;refseq.codonCoord_3=99;refseq.codonCoord_4=99;refseq.codonCoord_5=99;refseq.codonCoord_6=99;refseq.codonCoord_7=99;refseq.codonCoord_8=99;refseq.end_1=10019244;refseq.end_2=10019244;refseq.end_3=10019244;refseq.end_4=10019244;refseq.end_5=10019244;refseq.end_6=10019244;refseq.end_7=10019244;refseq.end_8=10019244;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.haplotypeReference_3=A;refseq.haplotypeReference_4=A;refseq.haplotypeReference_5=A;refseq.haplotypeReference_6=A;refseq.haplotypeReference_7=A;refseq.haplotypeReference_8=A;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=688;refseq.mrnaCoord_2=624;refseq.mrnaCoord_3=688;refseq.mrnaCoord_4=624;refseq.mrnaCoord_5=688;refseq.mrnaCoord_6=624;refseq.mrnaCoord_7=688;refseq.mrnaCoord_8=624;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.I99I;refseq.proteinCoordStr_2=p.I99I;refseq.proteinCoordStr_3=p.I99L;refseq.proteinCoordStr_4=p.I99L;refseq.proteinCoordStr_5=p.I99V;refseq.proteinCoordStr_6=p.I99V;refseq.proteinCoordStr_7=p.I99L;refseq.proteinCoordStr_8=p.I99L;refseq.referenceAA_1=Ile;refseq.referenceAA_2=Ile;refseq.referenceAA_3=Ile;refseq.referenceAA_4=Ile;refseq.referenceAA_5=Ile;refseq.referenceAA_6=Ile;refseq.referenceAA_7=Ile;refseq.referenceAA_8=Ile;refseq.referenceCodon_1=ATA;refseq.referenceCodon_2=ATA;refseq.referenceCodon_3=ATA;refseq.referenceCodon_4=ATA;refseq.referenceCodon_5=ATA;refseq.referenceCodon_6=ATA;refseq.referenceCodon_7=ATA;refseq.referenceCodon_8=ATA;refseq.spliceDist_1=-52;refseq.spliceDist_2=-52;refseq.spliceDist_3=-52;refseq.spliceDist_4=-52;refseq.spliceDist_5=-52;refseq.spliceDist_6=-52;refseq.spliceDist_7=-52;refseq.spliceDist_8=-52;refseq.start_1=10019244;refseq.start_2=10019244;refseq.start_3=10019244;refseq.start_4=10019244;refseq.start_5=10019244;refseq.start_6=10019244;refseq.start_7=10019244;refseq.start_8=10019244;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Ile;refseq.variantAA_2=Ile;refseq.variantAA_3=Leu;refseq.variantAA_4=Leu;refseq.variantAA_5=Val;refseq.variantAA_6=Val;refseq.variantAA_7=Leu;refseq.variantAA_8=Leu;refseq.variantCodon_1=ATA;refseq.variantCodon_2=ATA;refseq.variantCodon_3=CTA;refseq.variantCodon_4=CTA;refseq.variantCodon_5=GTA;refseq.variantCodon_6=GTA;refseq.variantCodon_7=TTA;refseq.variantCodon_8=TTA GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:11:30:0,30,348 0/0:6:18:0,18,219
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20 10019340 rs73897518 T . 569.32 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,140 0/0:4:12:0,12,143 0/0:2:6:0,6,72
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|
20 10019478 . A . 233.35 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:7:21:0,21,238 0/0:3:9:0,9,111
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20 10019632 rs6087110 G A 27153.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:5:47:47,0,84 0/0:7:21:0,21,233 1/1:4:12:146,12,0
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20 10019837 rs77903039 A . 546.50 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:3:9:0,9,106 0/0:6:18:0,18,215
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20 10020229 rs596203 G . 24454.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:6:18:0,18,195 0/0:6:18:0,18,178
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|
20 10020296 . C . 116.76 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:3:9:0,9,97 0/0:7:21:0,21,202
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|
20 10020316 rs78440104 A . 201.06 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:3:9:0,9,109 0/0:6:18:0,18,219
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|
20 10020378 rs76911831 A . 13.92 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:8:24:0,24,268 0/0:4:12:0,12,135 0/0:5:15:0,15,181
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|
20 10020387 . A . 31.75 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,257 0/0:6:15:0,15,173 0/0:4:12:0,12,142
|
|
20 10020400 . C . 68.41 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,138 0/0:5:15:0,15,159 0/0:6:18:0,18,189
|
|
20 10020404 . C . 105.05 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,171 0/0:5:15:0,15,148 0/0:6:18:0,18,188
|
|
20 10020444 . A . 358.91 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,211 0/0:4:12:0,12,142 0/0:6:18:0,18,222
|
|
20 10020718 rs117974525 A . 668.54 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=23;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,248 0/0:10:30:0,30,340 0/0:6:18:0,18,204
|
|
20 10020739 rs117643677 C A 674.33 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=22;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:5:55:91,0,55 0/0:11:33:0,33,365 0/0:6:18:0,18,191
|
|
20 10021091 . C . 88.58 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,79 0/0:9:27:0,27,276 0/0:2:6:0,6,59
|
|
20 10021092 . G . 35.46 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,97 0/0:9:27:0,27,294 0/0:2:6:0,6,65
|
|
20 10021182 . A . 51.48 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:5:15:0,15,173 0/0:3:9:0,9,110
|
|
20 10021254 . T . 59.24 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:10:30:0,30,343 0/0:1:3:0,3,38
|
|
20 10021297 . C . 50.09 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,221 0/0:6:18:0,18,187 0/0:2:6:0,6,53
|
|
20 10021313 rs116290178 G . 393.69 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,175 0/0:7:21:0,21,248 0/0:2:6:0,6,70
|
|
20 10021368 . G . 96.08 PASS AC=0;AF=0.00;AN=6;DP=19;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,180 0/0:8:21:0,21,219 0/0:5:15:0,15,157
|
|
20 10021946 rs73254368 T . 4629.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:9:27:0,27,323 0/0:3:9:0,9,112 0/0:4:12:0,12,146
|
|
20 10021975 . C . 37.96 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,225 0/0:4:12:0,12,134 0/0:6:18:0,18,188
|
|
20 10022133 . C . 6.42 PASS AC=0;AF=0.00;AN=6;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:6:18:0,18,215 0/0:2:6:0,6,67
|
|
20 10022134 . A . 46.30 PASS AC=0;AF=0.00;AN=6;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:6:18:0,18,207 0/0:2:6:0,6,76
|
|
20 10022842 . T . 28.62 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:3:9:0,9,101 0/0:2:6:0,6,57
|
|
20 10022942 . G . 1078.61 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:8:24:0,24,239 0/0:3:9:0,9,78 0/0:4:12:0,12,121
|
|
20 10023080 rs113671103 T . 1033.70 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=6;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:2:6:0,6,69 0/0:1:3:0,3,37
|
|
20 10023106 . T . 156.60 PASS AC=0;AF=0.00;AN=6;DP=5;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:2:6:0,6,57 0/0:1:3:0,3,36
|
|
20 10023133 . T . 33.85 PASS AC=0;AF=0.00;AN=6;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,142 0/0:6:18:0,18,194 0/0:3:9:0,9,93
|
|
20 10023231 rs80291549 G . 338.34 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,82 0/0:4:12:0,12,106 0/0:2:6:0,6,67
|
|
20 10023300 . C . 1057.33 PASS AC=0;AF=0.00;AN=6;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,192 0/0:4:12:0,12,141 0/0:2:6:0,6,72
|
|
20 10023442 rs641648 G . 51546.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=11;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,164 0/0:6:18:0,18,201 ./.
|
|
20 10023467 . A . 42.69 PASS AC=0;AF=0.00;AN=4;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,64 0/0:6:15:0,15,173 ./.
|
|
20 10023576 rs76187113 G . 54.59 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:7:21:0,21,232 0/0:1:3:0,3,36
|
|
20 10023689 rs4813909 G A 45443.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:5:21:21,0,122 0/1:3:25:25,0,51 0/0:5:15:0,15,177
|
|
20 10023750 rs41275626 G . 116.39 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=19;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10023759;refseq.end_2=10023759;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10019306;refseq.start_2=10019306;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,239 0/0:5:15:0,15,157 0/0:7:21:0,21,251
|
|
20 10024003 rs114733618 G . 380.37 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,131 0/0:5:15:0,15,163 0/0:3:9:0,9,100
|
|
20 10024032 . C . 29.09 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,237 0/0:5:15:0,15,175 0/0:4:12:0,12,146
|
|
20 10024265 . T . 275.84 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:8:24:0,24,279 0/0:4:12:0,12,141 0/0:3:9:0,9,111
|
|
20 10024289 . T . 186.31 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,145 0/0:4:12:0,12,141 0/0:2:6:0,6,76
|
|
20 10024328 . A . 211.15 PASS AC=0;AF=0.00;AN=4;DP=6;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:2:6:0,6,70 ./.
|
|
20 10024388 rs6108384 C . 11469.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,126 0/0:4:12:0,12,129 0/0:1:3:0,3,31
|
|
20 10024555 . C . 97.53 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:4:12:0,12,137 0/0:1:3:0,3,35
|
|
20 10024576 . G . 129.61 PASS AC=0;AF=0.00;AN=6;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,207 0/0:4:12:0,12,113 0/0:2:6:0,6,57
|
|
20 10024704 . A . 742.05 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,175 0/0:2:6:0,6,73
|
|
20 10024844 . A . 58.73 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,182 0/0:4:12:0,12,141 0/0:1:3:0,3,38
|
|
20 10024852 . G . 33.37 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,106 0/0:3:9:0,9,89 0/0:1:3:0,3,30
|
|
20 10024906 . G . 181.32 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:5:15:0,15,170 0/0:4:12:0,12,146
|
|
20 10024950 rs6039662 G . 20290.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,241 0/0:5:15:0,15,167 0/0:4:12:0,12,138
|
|
20 10024951 rs6039663 G . 20219.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14;HAPMAP;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,235 0/0:4:12:0,12,142 0/0:3:9:0,9,102
|
|
20 10025003 rs117704926 G . 247.90 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10025031;refseq.end_2=10025031;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10023980;refseq.start_2=10023980;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,139 0/0:2:6:0,6,73 0/0:4:12:0,12,139
|
|
20 10025235 . T . 13.22 PASS AC=0;AF=0.00;AN=6;DP=19;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:8:24:0,24,289 0/0:5:15:0,15,178 0/0:6:18:0,18,229
|
|
20 10025262 . A . 204.88 PASS AC=0;AF=0.00;AN=6;DP=19;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,241 0/0:6:18:0,18,209 0/0:6:18:0,18,194
|
|
20 10025278 . G . 142.37 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,115 0/0:7:21:0,21,225 0/0:6:18:0,18,177
|
|
20 10025438 rs116375417 G . 361.33 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,131 0/0:6:18:0,18,192 0/0:3:9:0,9,82
|
|
20 10025594 . T . 127 PASS AC=0;AF=0.00;AN=6;DP=21;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,142 0/0:11:33:0,33,390 0/0:6:18:0,18,205
|
|
20 10025782 . G . 26.05 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:9:27:0,27,262 0/0:4:12:0,12,121 0/0:4:12:0,12,118
|
|
20 10025789 . A . 91.97 PASS AC=0;AF=0.00;AN=6;DP=20;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:10:30:0,30,358 0/0:5:15:0,15,167 0/0:5:15:0,15,186
|
|
20 10025882 rs79509244 A . 577.91 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,193 0/0:10:30:0,30,341 0/0:2:6:0,6,75
|
|
20 10025999 . A . 48.03 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,36 0/0:6:18:0,18,221 0/0:3:9:0,9,109
|
|
20 10026088 rs78284012 C . 785.65 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,56 0/0:2:6:0,6,73 0/0:4:12:0,12,133
|
|
20 10026108 rs6077636 A G 29644.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=8;HAPMAP;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:2:27:27,0,29 0/0:2:6:0,6,74 1/1:4:12:120,12,0
|
|
20 10026126 . T . 500.89 PASS AC=0;AF=0.00;AN=6;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10026211;refseq.end_2=10026211;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10025202;refseq.start_2=10025202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:3:9:0,9,111 0/0:5:15:0,15,185
|
|
20 10026357 rs685723 T . 20974.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9;HAPMAP;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:4:12:0,12,135 0/0:2:6:0,6,75
|
|
20 10026450 . T . 8.49 PASS AC=0;AF=0.00;AN=4;DP=7;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,170 ./. 0/0:2:6:0,6,69
|
|
20 10026497 . C . 111.19 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,88 0/0:2:6:0,6,69 0/0:4:12:0,12,144
|
|
20 10026530 . G . 227.88 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,60 0/0:3:9:0,9,78 0/0:3:9:0,9,92
|
|
20 10026550 . C . 23.91 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:3:9:0,9,105 0/0:3:9:0,9,108
|
|
20 10026791 rs6087116 C T 18528.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:2:21:29,0,21 0/0:5:15:0,15,145 1/1:1:3:39,3,0
|
|
20 10026794 rs687514 C . 17259.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,61 0/0:5:15:0,15,152 0/0:1:3:0,3,28
|
|
20 10027389 rs115021616 C . 696.10 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,202 0/0:3:9:0,9,99 0/0:4:12:0,12,130
|
|
20 10027409 rs116687957 A . 85.60 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,244 0/0:3:9:0,9,104 0/0:4:12:0,12,154
|
|
20 10027450 . T . 66.62 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:5:15:0,15,163 0/0:5:15:0,15,184
|
|
20 10027717 . C . 57.77 PASS AC=0;AF=0.00;AN=4;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,171 ./. 0/0:5:15:0,15,181
|
|
20 10027718 rs80135777 C . 876.49 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:1:3:0,3,23 0/0:5:15:0,15,178
|
|
20 10027759 rs13042685 C . 481.66 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,160 0/0:2:6:0,6,68 0/0:6:18:0,18,201
|
|
20 10027792 . G . 29.47 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,155 0/0:2:6:0,6,53 0/0:2:6:0,6,69
|
|
20 10027838 rs75656043 A . 935.76 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=4;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:2:6:0,6,67 0/0:1:3:0,3,38
|
|
20 10027868 rs514832 A . 17716.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=5;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:3:9:0,9,92 ./.
|
|
20 10027872 rs594811 A . 19224.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=6;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:3:9:0,9,94 0/0:1:3:0,3,37
|
|
20 10027971 rs75666939 A . 921.41 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:9:24:0,24,277 0/0:1:3:0,3,34
|
|
20 10028121 rs79641094 G . 2591.43 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:6:18:0,18,203 0/0:1:3:0,3,30
|
|
20 10028146 rs2024802 T C 29119.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=16;HAPMAP;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:6:52:52,0,125 0/0:9:27:0,27,318 1/1:1:3:35,3,0
|
|
20 10028186 . A . 3.91 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,228 0/0:6:18:0,18,200 0/0:1:3:0,3,35
|
|
20 10028202 . C . 120.70 PASS AC=0;AF=0.00;AN=6;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:5:15:0,15,172 0/0:1:3:0,3,36
|
|
20 10028245 rs117138633 T . 166.82 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,96 0/0:5:15:0,15,180 0/0:2:6:0,6,65
|
|
20 10028302 rs6118867 G . 2442.86 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,143 0/0:3:9:0,9,89 0/0:2:6:0,6,51
|
|
20 10028471 . G . 124.16 PASS AC=0;AF=0.00;AN=6;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,53 0/0:6:18:0,18,190 0/0:3:9:0,9,83
|
|
20 10028506 . T . 7.95 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:6:18:0,18,204 0/0:4:12:0,12,147
|
|
20 10028686 . A . 514.92 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,218 0/0:7:21:0,21,242 0/0:1:3:0,3,30
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|
20 10028725 rs16996688 A . 7336.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,211 0/0:7:21:0,21,234 ./.
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|
20 10028737 . C . 360.86 PASS AC=0;AF=0.00;AN=6;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,159 0/0:6:18:0,18,186 0/0:1:3:0,3,31
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|
20 10028772 rs116772803 A . 92.18 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:4:12:0,12,137 0/0:3:9:0,9,102
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|
20 10028777 . A . 70.28 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,97 0/0:3:9:0,9,108
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|
20 10028807 . G . 51.22 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,92 0/0:3:9:0,9,107 0/0:4:12:0,12,128
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|
20 10029011 . C . 138.14 PASS AC=0;AF=0.00;AN=6;DP=7;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:3:9:0,9,100 0/0:2:6:0,6,71
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|
20 10029104 rs580664 G A 65226.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:4:25:25,0,89 0/0:3:9:0,9,92 1/1:3:9:95,9,0
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|
20 10029114 . G . 84.65 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,203 0/0:2:6:0,6,63 0/0:2:6:0,6,69
|
|
20 10029215 . A . 110.49 PASS AC=0;AF=0.00;AN=6;DP=7;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:4:12:0,12,133 0/0:1:3:0,3,38
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|
20 10029297 . G . 35.53 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,209 0/0:4:12:0,12,127 0/0:4:12:0,12,143
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|
20 10029347 rs77817020 G . 335.55 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:5:15:0,15,172 0/0:4:12:0,12,141
|
|
20 10029555 . C . 287.33 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,115 0/0:9:27:0,27,286 0/0:4:12:0,12,124
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|
20 10029556 . G . 535.11 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,96 0/0:10:30:0,30,259 0/0:4:12:0,12,126
|
|
20 10029613 rs73897523 G . 19.85 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=19;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:9:27:0,27,309 0/0:4:12:0,12,134 0/0:6:18:0,18,206
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|
20 10029826 rs118012679 C . 110.76 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10030027;refseq.end_2=10030027;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10026356;refseq.start_2=10026356;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,96 0/0:3:9:0,9,108
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|
20 10030174 rs115583213 A . 182.38 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.957A>A;refseq.codingCoordStr_2=c.957A>A;refseq.codingCoordStr_3=c.957A>C;refseq.codingCoordStr_4=c.957A>C;refseq.codingCoordStr_5=c.957A>G;refseq.codingCoordStr_6=c.957A>G;refseq.codingCoordStr_7=c.957A>T;refseq.codingCoordStr_8=c.957A>T;refseq.codonCoord_1=319;refseq.codonCoord_2=319;refseq.codonCoord_3=319;refseq.codonCoord_4=319;refseq.codonCoord_5=319;refseq.codonCoord_6=319;refseq.codonCoord_7=319;refseq.codonCoord_8=319;refseq.end_1=10030174;refseq.end_2=10030174;refseq.end_3=10030174;refseq.end_4=10030174;refseq.end_5=10030174;refseq.end_6=10030174;refseq.end_7=10030174;refseq.end_8=10030174;refseq.frame_1=2;refseq.frame_2=2;refseq.frame_3=2;refseq.frame_4=2;refseq.frame_5=2;refseq.frame_6=2;refseq.frame_7=2;refseq.frame_8=2;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.haplotypeReference_3=A;refseq.haplotypeReference_4=A;refseq.haplotypeReference_5=A;refseq.haplotypeReference_6=A;refseq.haplotypeReference_7=A;refseq.haplotypeReference_8=A;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1350;refseq.mrnaCoord_2=1286;refseq.mrnaCoord_3=1350;refseq.mrnaCoord_4=1286;refseq.mrnaCoord_5=1350;refseq.mrnaCoord_6=1286;refseq.mrnaCoord_7=1350;refseq.mrnaCoord_8=1286;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.K319K;refseq.proteinCoordStr_2=p.K319K;refseq.proteinCoordStr_3=p.K319N;refseq.proteinCoordStr_4=p.K319N;refseq.proteinCoordStr_5=p.K319K;refseq.proteinCoordStr_6=p.K319K;refseq.proteinCoordStr_7=p.K319N;refseq.proteinCoordStr_8=p.K319N;refseq.referenceAA_1=Lys;refseq.referenceAA_2=Lys;refseq.referenceAA_3=Lys;refseq.referenceAA_4=Lys;refseq.referenceAA_5=Lys;refseq.referenceAA_6=Lys;refseq.referenceAA_7=Lys;refseq.referenceAA_8=Lys;refseq.referenceCodon_1=AAA;refseq.referenceCodon_2=AAA;refseq.referenceCodon_3=AAA;refseq.referenceCodon_4=AAA;refseq.referenceCodon_5=AAA;refseq.referenceCodon_6=AAA;refseq.referenceCodon_7=AAA;refseq.referenceCodon_8=AAA;refseq.spliceDist_1=137;refseq.spliceDist_2=137;refseq.spliceDist_3=137;refseq.spliceDist_4=137;refseq.spliceDist_5=137;refseq.spliceDist_6=137;refseq.spliceDist_7=137;refseq.spliceDist_8=137;refseq.start_1=10030174;refseq.start_2=10030174;refseq.start_3=10030174;refseq.start_4=10030174;refseq.start_5=10030174;refseq.start_6=10030174;refseq.start_7=10030174;refseq.start_8=10030174;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Lys;refseq.variantAA_2=Lys;refseq.variantAA_3=Asn;refseq.variantAA_4=Asn;refseq.variantAA_5=Lys;refseq.variantAA_6=Lys;refseq.variantAA_7=Asn;refseq.variantAA_8=Asn;refseq.variantCodon_1=AAA;refseq.variantCodon_2=AAA;refseq.variantCodon_3=AAC;refseq.variantCodon_4=AAC;refseq.variantCodon_5=AAG;refseq.variantCodon_6=AAG;refseq.variantCodon_7=AAT;refseq.variantCodon_8=AAT GT:DP:GQ:PL 0/0:7:21:0,21,231 0/0:3:9:0,9,101 0/0:3:9:0,9,112
|
|
20 10030184 . C . 149.07 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.967C>A;refseq.codingCoordStr_2=c.967C>A;refseq.codingCoordStr_3=c.967C>C;refseq.codingCoordStr_4=c.967C>C;refseq.codingCoordStr_5=c.967C>G;refseq.codingCoordStr_6=c.967C>G;refseq.codingCoordStr_7=c.967C>T;refseq.codingCoordStr_8=c.967C>T;refseq.codonCoord_1=323;refseq.codonCoord_2=323;refseq.codonCoord_3=323;refseq.codonCoord_4=323;refseq.codonCoord_5=323;refseq.codonCoord_6=323;refseq.codonCoord_7=323;refseq.codonCoord_8=323;refseq.end_1=10030184;refseq.end_2=10030184;refseq.end_3=10030184;refseq.end_4=10030184;refseq.end_5=10030184;refseq.end_6=10030184;refseq.end_7=10030184;refseq.end_8=10030184;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1360;refseq.mrnaCoord_2=1296;refseq.mrnaCoord_3=1360;refseq.mrnaCoord_4=1296;refseq.mrnaCoord_5=1360;refseq.mrnaCoord_6=1296;refseq.mrnaCoord_7=1360;refseq.mrnaCoord_8=1296;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.P323T;refseq.proteinCoordStr_2=p.P323T;refseq.proteinCoordStr_3=p.P323P;refseq.proteinCoordStr_4=p.P323P;refseq.proteinCoordStr_5=p.P323A;refseq.proteinCoordStr_6=p.P323A;refseq.proteinCoordStr_7=p.P323S;refseq.proteinCoordStr_8=p.P323S;refseq.referenceAA_1=Pro;refseq.referenceAA_2=Pro;refseq.referenceAA_3=Pro;refseq.referenceAA_4=Pro;refseq.referenceAA_5=Pro;refseq.referenceAA_6=Pro;refseq.referenceAA_7=Pro;refseq.referenceAA_8=Pro;refseq.referenceCodon_1=CCA;refseq.referenceCodon_2=CCA;refseq.referenceCodon_3=CCA;refseq.referenceCodon_4=CCA;refseq.referenceCodon_5=CCA;refseq.referenceCodon_6=CCA;refseq.referenceCodon_7=CCA;refseq.referenceCodon_8=CCA;refseq.spliceDist_1=147;refseq.spliceDist_2=147;refseq.spliceDist_3=147;refseq.spliceDist_4=147;refseq.spliceDist_5=147;refseq.spliceDist_6=147;refseq.spliceDist_7=147;refseq.spliceDist_8=147;refseq.start_1=10030184;refseq.start_2=10030184;refseq.start_3=10030184;refseq.start_4=10030184;refseq.start_5=10030184;refseq.start_6=10030184;refseq.start_7=10030184;refseq.start_8=10030184;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Thr;refseq.variantAA_2=Thr;refseq.variantAA_3=Pro;refseq.variantAA_4=Pro;refseq.variantAA_5=Ala;refseq.variantAA_6=Ala;refseq.variantAA_7=Ser;refseq.variantAA_8=Ser;refseq.variantCodon_1=ACA;refseq.variantCodon_2=ACA;refseq.variantCodon_3=CCA;refseq.variantCodon_4=CCA;refseq.variantCodon_5=GCA;refseq.variantCodon_6=GCA;refseq.variantCodon_7=TCA;refseq.variantCodon_8=TCA GT:DP:GQ:PL 0/0:7:21:0,21,226 0/0:4:12:0,12,140 0/0:3:9:0,9,102
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|
20 10030188 rs652633 T . 19624.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.971T>A;refseq.codingCoordStr_2=c.971T>A;refseq.codingCoordStr_3=c.971T>C;refseq.codingCoordStr_4=c.971T>C;refseq.codingCoordStr_5=c.971T>G;refseq.codingCoordStr_6=c.971T>G;refseq.codingCoordStr_7=c.971T>T;refseq.codingCoordStr_8=c.971T>T;refseq.codonCoord_1=324;refseq.codonCoord_2=324;refseq.codonCoord_3=324;refseq.codonCoord_4=324;refseq.codonCoord_5=324;refseq.codonCoord_6=324;refseq.codonCoord_7=324;refseq.codonCoord_8=324;refseq.end_1=10030188;refseq.end_2=10030188;refseq.end_3=10030188;refseq.end_4=10030188;refseq.end_5=10030188;refseq.end_6=10030188;refseq.end_7=10030188;refseq.end_8=10030188;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1364;refseq.mrnaCoord_2=1300;refseq.mrnaCoord_3=1364;refseq.mrnaCoord_4=1300;refseq.mrnaCoord_5=1364;refseq.mrnaCoord_6=1300;refseq.mrnaCoord_7=1364;refseq.mrnaCoord_8=1300;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.L324Q;refseq.proteinCoordStr_2=p.L324Q;refseq.proteinCoordStr_3=p.L324P;refseq.proteinCoordStr_4=p.L324P;refseq.proteinCoordStr_5=p.L324R;refseq.proteinCoordStr_6=p.L324R;refseq.proteinCoordStr_7=p.L324L;refseq.proteinCoordStr_8=p.L324L;refseq.referenceAA_1=Leu;refseq.referenceAA_2=Leu;refseq.referenceAA_3=Leu;refseq.referenceAA_4=Leu;refseq.referenceAA_5=Leu;refseq.referenceAA_6=Leu;refseq.referenceAA_7=Leu;refseq.referenceAA_8=Leu;refseq.referenceCodon_1=CTG;refseq.referenceCodon_2=CTG;refseq.referenceCodon_3=CTG;refseq.referenceCodon_4=CTG;refseq.referenceCodon_5=CTG;refseq.referenceCodon_6=CTG;refseq.referenceCodon_7=CTG;refseq.referenceCodon_8=CTG;refseq.spliceDist_1=151;refseq.spliceDist_2=151;refseq.spliceDist_3=151;refseq.spliceDist_4=151;refseq.spliceDist_5=151;refseq.spliceDist_6=151;refseq.spliceDist_7=151;refseq.spliceDist_8=151;refseq.start_1=10030188;refseq.start_2=10030188;refseq.start_3=10030188;refseq.start_4=10030188;refseq.start_5=10030188;refseq.start_6=10030188;refseq.start_7=10030188;refseq.start_8=10030188;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Gln;refseq.variantAA_2=Gln;refseq.variantAA_3=Pro;refseq.variantAA_4=Pro;refseq.variantAA_5=Arg;refseq.variantAA_6=Arg;refseq.variantAA_7=Leu;refseq.variantAA_8=Leu;refseq.variantCodon_1=CAG;refseq.variantCodon_2=CAG;refseq.variantCodon_3=CCG;refseq.variantCodon_4=CCG;refseq.variantCodon_5=CGG;refseq.variantCodon_6=CGG;refseq.variantCodon_7=CTG;refseq.variantCodon_8=CTG GT:DP:GQ:PL 0/0:7:21:0,21,237 0/0:4:12:0,12,139 0/0:2:6:0,6,75
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20 10030207 . C . 145.25 PASS AC=0;AF=0.00;AN=6;DP=12;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.990C>A;refseq.codingCoordStr_2=c.990C>A;refseq.codingCoordStr_3=c.990C>C;refseq.codingCoordStr_4=c.990C>C;refseq.codingCoordStr_5=c.990C>G;refseq.codingCoordStr_6=c.990C>G;refseq.codingCoordStr_7=c.990C>T;refseq.codingCoordStr_8=c.990C>T;refseq.codonCoord_1=330;refseq.codonCoord_2=330;refseq.codonCoord_3=330;refseq.codonCoord_4=330;refseq.codonCoord_5=330;refseq.codonCoord_6=330;refseq.codonCoord_7=330;refseq.codonCoord_8=330;refseq.end_1=10030207;refseq.end_2=10030207;refseq.end_3=10030207;refseq.end_4=10030207;refseq.end_5=10030207;refseq.end_6=10030207;refseq.end_7=10030207;refseq.end_8=10030207;refseq.frame_1=2;refseq.frame_2=2;refseq.frame_3=2;refseq.frame_4=2;refseq.frame_5=2;refseq.frame_6=2;refseq.frame_7=2;refseq.frame_8=2;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1383;refseq.mrnaCoord_2=1319;refseq.mrnaCoord_3=1383;refseq.mrnaCoord_4=1319;refseq.mrnaCoord_5=1383;refseq.mrnaCoord_6=1319;refseq.mrnaCoord_7=1383;refseq.mrnaCoord_8=1319;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.H330Q;refseq.proteinCoordStr_2=p.H330Q;refseq.proteinCoordStr_3=p.H330H;refseq.proteinCoordStr_4=p.H330H;refseq.proteinCoordStr_5=p.H330Q;refseq.proteinCoordStr_6=p.H330Q;refseq.proteinCoordStr_7=p.H330H;refseq.proteinCoordStr_8=p.H330H;refseq.referenceAA_1=His;refseq.referenceAA_2=His;refseq.referenceAA_3=His;refseq.referenceAA_4=His;refseq.referenceAA_5=His;refseq.referenceAA_6=His;refseq.referenceAA_7=His;refseq.referenceAA_8=His;refseq.referenceCodon_1=CAC;refseq.referenceCodon_2=CAC;refseq.referenceCodon_3=CAC;refseq.referenceCodon_4=CAC;refseq.referenceCodon_5=CAC;refseq.referenceCodon_6=CAC;refseq.referenceCodon_7=CAC;refseq.referenceCodon_8=CAC;refseq.spliceDist_1=170;refseq.spliceDist_2=170;refseq.spliceDist_3=170;refseq.spliceDist_4=170;refseq.spliceDist_5=170;refseq.spliceDist_6=170;refseq.spliceDist_7=170;refseq.spliceDist_8=170;refseq.start_1=10030207;refseq.start_2=10030207;refseq.start_3=10030207;refseq.start_4=10030207;refseq.start_5=10030207;refseq.start_6=10030207;refseq.start_7=10030207;refseq.start_8=10030207;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Gln;refseq.variantAA_2=Gln;refseq.variantAA_3=His;refseq.variantAA_4=His;refseq.variantAA_5=Gln;refseq.variantAA_6=Gln;refseq.variantAA_7=His;refseq.variantAA_8=His;refseq.variantCodon_1=CAA;refseq.variantCodon_2=CAA;refseq.variantCodon_3=CAC;refseq.variantCodon_4=CAC;refseq.variantCodon_5=CAG;refseq.variantCodon_6=CAG;refseq.variantCodon_7=CAT;refseq.variantCodon_8=CAT GT:DP:GQ:PL 0/0:7:21:0,21,201 0/0:4:12:0,12,130 0/0:1:3:0,3,30
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|
20 10030252 . G . 3.65 PASS AC=0;AF=0.00;AN=4;DP=12;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1035G>A;refseq.codingCoordStr_2=c.1035G>A;refseq.codingCoordStr_3=c.1035G>C;refseq.codingCoordStr_4=c.1035G>C;refseq.codingCoordStr_5=c.1035G>G;refseq.codingCoordStr_6=c.1035G>G;refseq.codingCoordStr_7=c.1035G>T;refseq.codingCoordStr_8=c.1035G>T;refseq.codonCoord_1=345;refseq.codonCoord_2=345;refseq.codonCoord_3=345;refseq.codonCoord_4=345;refseq.codonCoord_5=345;refseq.codonCoord_6=345;refseq.codonCoord_7=345;refseq.codonCoord_8=345;refseq.end_1=10030252;refseq.end_2=10030252;refseq.end_3=10030252;refseq.end_4=10030252;refseq.end_5=10030252;refseq.end_6=10030252;refseq.end_7=10030252;refseq.end_8=10030252;refseq.frame_1=2;refseq.frame_2=2;refseq.frame_3=2;refseq.frame_4=2;refseq.frame_5=2;refseq.frame_6=2;refseq.frame_7=2;refseq.frame_8=2;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1428;refseq.mrnaCoord_2=1364;refseq.mrnaCoord_3=1428;refseq.mrnaCoord_4=1364;refseq.mrnaCoord_5=1428;refseq.mrnaCoord_6=1364;refseq.mrnaCoord_7=1428;refseq.mrnaCoord_8=1364;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.A345A;refseq.proteinCoordStr_2=p.A345A;refseq.proteinCoordStr_3=p.A345A;refseq.proteinCoordStr_4=p.A345A;refseq.proteinCoordStr_5=p.A345A;refseq.proteinCoordStr_6=p.A345A;refseq.proteinCoordStr_7=p.A345A;refseq.proteinCoordStr_8=p.A345A;refseq.referenceAA_1=Ala;refseq.referenceAA_2=Ala;refseq.referenceAA_3=Ala;refseq.referenceAA_4=Ala;refseq.referenceAA_5=Ala;refseq.referenceAA_6=Ala;refseq.referenceAA_7=Ala;refseq.referenceAA_8=Ala;refseq.referenceCodon_1=GCG;refseq.referenceCodon_2=GCG;refseq.referenceCodon_3=GCG;refseq.referenceCodon_4=GCG;refseq.referenceCodon_5=GCG;refseq.referenceCodon_6=GCG;refseq.referenceCodon_7=GCG;refseq.referenceCodon_8=GCG;refseq.spliceDist_1=215;refseq.spliceDist_2=215;refseq.spliceDist_3=215;refseq.spliceDist_4=215;refseq.spliceDist_5=215;refseq.spliceDist_6=215;refseq.spliceDist_7=215;refseq.spliceDist_8=215;refseq.start_1=10030252;refseq.start_2=10030252;refseq.start_3=10030252;refseq.start_4=10030252;refseq.start_5=10030252;refseq.start_6=10030252;refseq.start_7=10030252;refseq.start_8=10030252;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Ala;refseq.variantAA_2=Ala;refseq.variantAA_3=Ala;refseq.variantAA_4=Ala;refseq.variantAA_5=Ala;refseq.variantAA_6=Ala;refseq.variantAA_7=Ala;refseq.variantAA_8=Ala;refseq.variantCodon_1=GCA;refseq.variantCodon_2=GCA;refseq.variantCodon_3=GCC;refseq.variantCodon_4=GCC;refseq.variantCodon_5=GCG;refseq.variantCodon_6=GCG;refseq.variantCodon_7=GCT;refseq.variantCodon_8=GCT GT:DP:GQ:PL 0/0:7:21:0,21,210 0/0:5:15:0,15,135 ./.
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|
20 10030447 . G . 117.66 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1230G>A;refseq.codingCoordStr_2=c.1230G>A;refseq.codingCoordStr_3=c.1230G>C;refseq.codingCoordStr_4=c.1230G>C;refseq.codingCoordStr_5=c.1230G>G;refseq.codingCoordStr_6=c.1230G>G;refseq.codingCoordStr_7=c.1230G>T;refseq.codingCoordStr_8=c.1230G>T;refseq.codonCoord_1=410;refseq.codonCoord_2=410;refseq.codonCoord_3=410;refseq.codonCoord_4=410;refseq.codonCoord_5=410;refseq.codonCoord_6=410;refseq.codonCoord_7=410;refseq.codonCoord_8=410;refseq.end_1=10030447;refseq.end_2=10030447;refseq.end_3=10030447;refseq.end_4=10030447;refseq.end_5=10030447;refseq.end_6=10030447;refseq.end_7=10030447;refseq.end_8=10030447;refseq.frame_1=2;refseq.frame_2=2;refseq.frame_3=2;refseq.frame_4=2;refseq.frame_5=2;refseq.frame_6=2;refseq.frame_7=2;refseq.frame_8=2;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1623;refseq.mrnaCoord_2=1559;refseq.mrnaCoord_3=1623;refseq.mrnaCoord_4=1559;refseq.mrnaCoord_5=1623;refseq.mrnaCoord_6=1559;refseq.mrnaCoord_7=1623;refseq.mrnaCoord_8=1559;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.S410S;refseq.proteinCoordStr_2=p.S410S;refseq.proteinCoordStr_3=p.S410S;refseq.proteinCoordStr_4=p.S410S;refseq.proteinCoordStr_5=p.S410S;refseq.proteinCoordStr_6=p.S410S;refseq.proteinCoordStr_7=p.S410S;refseq.proteinCoordStr_8=p.S410S;refseq.referenceAA_1=Ser;refseq.referenceAA_2=Ser;refseq.referenceAA_3=Ser;refseq.referenceAA_4=Ser;refseq.referenceAA_5=Ser;refseq.referenceAA_6=Ser;refseq.referenceAA_7=Ser;refseq.referenceAA_8=Ser;refseq.referenceCodon_1=TCG;refseq.referenceCodon_2=TCG;refseq.referenceCodon_3=TCG;refseq.referenceCodon_4=TCG;refseq.referenceCodon_5=TCG;refseq.referenceCodon_6=TCG;refseq.referenceCodon_7=TCG;refseq.referenceCodon_8=TCG;refseq.spliceDist_1=410;refseq.spliceDist_2=410;refseq.spliceDist_3=410;refseq.spliceDist_4=410;refseq.spliceDist_5=410;refseq.spliceDist_6=410;refseq.spliceDist_7=410;refseq.spliceDist_8=410;refseq.start_1=10030447;refseq.start_2=10030447;refseq.start_3=10030447;refseq.start_4=10030447;refseq.start_5=10030447;refseq.start_6=10030447;refseq.start_7=10030447;refseq.start_8=10030447;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Ser;refseq.variantAA_2=Ser;refseq.variantAA_3=Ser;refseq.variantAA_4=Ser;refseq.variantAA_5=Ser;refseq.variantAA_6=Ser;refseq.variantAA_7=Ser;refseq.variantAA_8=Ser;refseq.variantCodon_1=TCA;refseq.variantCodon_2=TCA;refseq.variantCodon_3=TCC;refseq.variantCodon_4=TCC;refseq.variantCodon_5=TCG;refseq.variantCodon_6=TCG;refseq.variantCodon_7=TCT;refseq.variantCodon_8=TCT GT:DP:GQ:PL 0/0:3:9:0,9,85 0/0:9:27:0,27,271 0/0:2:6:0,6,51
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20 10030452 rs524625 G . 21883.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1235G>A;refseq.codingCoordStr_2=c.1235G>A;refseq.codingCoordStr_3=c.1235G>C;refseq.codingCoordStr_4=c.1235G>C;refseq.codingCoordStr_5=c.1235G>G;refseq.codingCoordStr_6=c.1235G>G;refseq.codingCoordStr_7=c.1235G>T;refseq.codingCoordStr_8=c.1235G>T;refseq.codonCoord_1=412;refseq.codonCoord_2=412;refseq.codonCoord_3=412;refseq.codonCoord_4=412;refseq.codonCoord_5=412;refseq.codonCoord_6=412;refseq.codonCoord_7=412;refseq.codonCoord_8=412;refseq.end_1=10030452;refseq.end_2=10030452;refseq.end_3=10030452;refseq.end_4=10030452;refseq.end_5=10030452;refseq.end_6=10030452;refseq.end_7=10030452;refseq.end_8=10030452;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1628;refseq.mrnaCoord_2=1564;refseq.mrnaCoord_3=1628;refseq.mrnaCoord_4=1564;refseq.mrnaCoord_5=1628;refseq.mrnaCoord_6=1564;refseq.mrnaCoord_7=1628;refseq.mrnaCoord_8=1564;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.G412E;refseq.proteinCoordStr_2=p.G412E;refseq.proteinCoordStr_3=p.G412A;refseq.proteinCoordStr_4=p.G412A;refseq.proteinCoordStr_5=p.G412G;refseq.proteinCoordStr_6=p.G412G;refseq.proteinCoordStr_7=p.G412V;refseq.proteinCoordStr_8=p.G412V;refseq.referenceAA_1=Gly;refseq.referenceAA_2=Gly;refseq.referenceAA_3=Gly;refseq.referenceAA_4=Gly;refseq.referenceAA_5=Gly;refseq.referenceAA_6=Gly;refseq.referenceAA_7=Gly;refseq.referenceAA_8=Gly;refseq.referenceCodon_1=GGA;refseq.referenceCodon_2=GGA;refseq.referenceCodon_3=GGA;refseq.referenceCodon_4=GGA;refseq.referenceCodon_5=GGA;refseq.referenceCodon_6=GGA;refseq.referenceCodon_7=GGA;refseq.referenceCodon_8=GGA;refseq.spliceDist_1=-409;refseq.spliceDist_2=-409;refseq.spliceDist_3=-409;refseq.spliceDist_4=-409;refseq.spliceDist_5=-409;refseq.spliceDist_6=-409;refseq.spliceDist_7=-409;refseq.spliceDist_8=-409;refseq.start_1=10030452;refseq.start_2=10030452;refseq.start_3=10030452;refseq.start_4=10030452;refseq.start_5=10030452;refseq.start_6=10030452;refseq.start_7=10030452;refseq.start_8=10030452;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Glu;refseq.variantAA_2=Glu;refseq.variantAA_3=Ala;refseq.variantAA_4=Ala;refseq.variantAA_5=Gly;refseq.variantAA_6=Gly;refseq.variantAA_7=Val;refseq.variantAA_8=Val;refseq.variantCodon_1=GAA;refseq.variantCodon_2=GAA;refseq.variantCodon_3=GCA;refseq.variantCodon_4=GCA;refseq.variantCodon_5=GGA;refseq.variantCodon_6=GGA;refseq.variantCodon_7=GTA;refseq.variantCodon_8=GTA GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:10:30:0,30,332 0/0:2:6:0,6,70
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20 10030508 rs118040899 T . 135.31 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17;OMNI;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1291T>A;refseq.codingCoordStr_2=c.1291T>A;refseq.codingCoordStr_3=c.1291T>C;refseq.codingCoordStr_4=c.1291T>C;refseq.codingCoordStr_5=c.1291T>G;refseq.codingCoordStr_6=c.1291T>G;refseq.codingCoordStr_7=c.1291T>T;refseq.codingCoordStr_8=c.1291T>T;refseq.codonCoord_1=431;refseq.codonCoord_2=431;refseq.codonCoord_3=431;refseq.codonCoord_4=431;refseq.codonCoord_5=431;refseq.codonCoord_6=431;refseq.codonCoord_7=431;refseq.codonCoord_8=431;refseq.end_1=10030508;refseq.end_2=10030508;refseq.end_3=10030508;refseq.end_4=10030508;refseq.end_5=10030508;refseq.end_6=10030508;refseq.end_7=10030508;refseq.end_8=10030508;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1684;refseq.mrnaCoord_2=1620;refseq.mrnaCoord_3=1684;refseq.mrnaCoord_4=1620;refseq.mrnaCoord_5=1684;refseq.mrnaCoord_6=1620;refseq.mrnaCoord_7=1684;refseq.mrnaCoord_8=1620;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.L431I;refseq.proteinCoordStr_2=p.L431I;refseq.proteinCoordStr_3=p.L431L;refseq.proteinCoordStr_4=p.L431L;refseq.proteinCoordStr_5=p.L431V;refseq.proteinCoordStr_6=p.L431V;refseq.proteinCoordStr_7=p.L431L;refseq.proteinCoordStr_8=p.L431L;refseq.referenceAA_1=Leu;refseq.referenceAA_2=Leu;refseq.referenceAA_3=Leu;refseq.referenceAA_4=Leu;refseq.referenceAA_5=Leu;refseq.referenceAA_6=Leu;refseq.referenceAA_7=Leu;refseq.referenceAA_8=Leu;refseq.referenceCodon_1=TTA;refseq.referenceCodon_2=TTA;refseq.referenceCodon_3=TTA;refseq.referenceCodon_4=TTA;refseq.referenceCodon_5=TTA;refseq.referenceCodon_6=TTA;refseq.referenceCodon_7=TTA;refseq.referenceCodon_8=TTA;refseq.spliceDist_1=-353;refseq.spliceDist_2=-353;refseq.spliceDist_3=-353;refseq.spliceDist_4=-353;refseq.spliceDist_5=-353;refseq.spliceDist_6=-353;refseq.spliceDist_7=-353;refseq.spliceDist_8=-353;refseq.start_1=10030508;refseq.start_2=10030508;refseq.start_3=10030508;refseq.start_4=10030508;refseq.start_5=10030508;refseq.start_6=10030508;refseq.start_7=10030508;refseq.start_8=10030508;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Ile;refseq.variantAA_2=Ile;refseq.variantAA_3=Leu;refseq.variantAA_4=Leu;refseq.variantAA_5=Val;refseq.variantAA_6=Val;refseq.variantAA_7=Leu;refseq.variantAA_8=Leu;refseq.variantCodon_1=ATA;refseq.variantCodon_2=ATA;refseq.variantCodon_3=CTA;refseq.variantCodon_4=CTA;refseq.variantCodon_5=GTA;refseq.variantCodon_6=GTA;refseq.variantCodon_7=TTA;refseq.variantCodon_8=TTA GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:11:33:0,33,387 0/0:2:6:0,6,76
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20 10030553 rs114206956 C . 30.45 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=10;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1336C>A;refseq.codingCoordStr_2=c.1336C>A;refseq.codingCoordStr_3=c.1336C>C;refseq.codingCoordStr_4=c.1336C>C;refseq.codingCoordStr_5=c.1336C>G;refseq.codingCoordStr_6=c.1336C>G;refseq.codingCoordStr_7=c.1336C>T;refseq.codingCoordStr_8=c.1336C>T;refseq.codonCoord_1=446;refseq.codonCoord_2=446;refseq.codonCoord_3=446;refseq.codonCoord_4=446;refseq.codonCoord_5=446;refseq.codonCoord_6=446;refseq.codonCoord_7=446;refseq.codonCoord_8=446;refseq.end_1=10030553;refseq.end_2=10030553;refseq.end_3=10030553;refseq.end_4=10030553;refseq.end_5=10030553;refseq.end_6=10030553;refseq.end_7=10030553;refseq.end_8=10030553;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1729;refseq.mrnaCoord_2=1665;refseq.mrnaCoord_3=1729;refseq.mrnaCoord_4=1665;refseq.mrnaCoord_5=1729;refseq.mrnaCoord_6=1665;refseq.mrnaCoord_7=1729;refseq.mrnaCoord_8=1665;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.R446R;refseq.proteinCoordStr_2=p.R446R;refseq.proteinCoordStr_3=p.R446R;refseq.proteinCoordStr_4=p.R446R;refseq.proteinCoordStr_5=p.R446G;refseq.proteinCoordStr_6=p.R446G;refseq.proteinCoordStr_7=p.R446W;refseq.proteinCoordStr_8=p.R446W;refseq.referenceAA_1=Arg;refseq.referenceAA_2=Arg;refseq.referenceAA_3=Arg;refseq.referenceAA_4=Arg;refseq.referenceAA_5=Arg;refseq.referenceAA_6=Arg;refseq.referenceAA_7=Arg;refseq.referenceAA_8=Arg;refseq.referenceCodon_1=CGG;refseq.referenceCodon_2=CGG;refseq.referenceCodon_3=CGG;refseq.referenceCodon_4=CGG;refseq.referenceCodon_5=CGG;refseq.referenceCodon_6=CGG;refseq.referenceCodon_7=CGG;refseq.referenceCodon_8=CGG;refseq.spliceDist_1=-308;refseq.spliceDist_2=-308;refseq.spliceDist_3=-308;refseq.spliceDist_4=-308;refseq.spliceDist_5=-308;refseq.spliceDist_6=-308;refseq.spliceDist_7=-308;refseq.spliceDist_8=-308;refseq.start_1=10030553;refseq.start_2=10030553;refseq.start_3=10030553;refseq.start_4=10030553;refseq.start_5=10030553;refseq.start_6=10030553;refseq.start_7=10030553;refseq.start_8=10030553;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Arg;refseq.variantAA_2=Arg;refseq.variantAA_3=Arg;refseq.variantAA_4=Arg;refseq.variantAA_5=Gly;refseq.variantAA_6=Gly;refseq.variantAA_7=Trp;refseq.variantAA_8=Trp;refseq.variantCodon_1=AGG;refseq.variantCodon_2=AGG;refseq.variantCodon_3=CGG;refseq.variantCodon_4=CGG;refseq.variantCodon_5=GGG;refseq.variantCodon_6=GGG;refseq.variantCodon_7=TGG;refseq.variantCodon_8=TGG GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:8:24:0,24,249 ./.
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20 10030572 . C . 27.46 PASS AC=0;AF=0.00;AN=4;DP=9;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1355C>A;refseq.codingCoordStr_2=c.1355C>A;refseq.codingCoordStr_3=c.1355C>C;refseq.codingCoordStr_4=c.1355C>C;refseq.codingCoordStr_5=c.1355C>G;refseq.codingCoordStr_6=c.1355C>G;refseq.codingCoordStr_7=c.1355C>T;refseq.codingCoordStr_8=c.1355C>T;refseq.codonCoord_1=452;refseq.codonCoord_2=452;refseq.codonCoord_3=452;refseq.codonCoord_4=452;refseq.codonCoord_5=452;refseq.codonCoord_6=452;refseq.codonCoord_7=452;refseq.codonCoord_8=452;refseq.end_1=10030572;refseq.end_2=10030572;refseq.end_3=10030572;refseq.end_4=10030572;refseq.end_5=10030572;refseq.end_6=10030572;refseq.end_7=10030572;refseq.end_8=10030572;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1748;refseq.mrnaCoord_2=1684;refseq.mrnaCoord_3=1748;refseq.mrnaCoord_4=1684;refseq.mrnaCoord_5=1748;refseq.mrnaCoord_6=1684;refseq.mrnaCoord_7=1748;refseq.mrnaCoord_8=1684;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.P452Q;refseq.proteinCoordStr_2=p.P452Q;refseq.proteinCoordStr_3=p.P452P;refseq.proteinCoordStr_4=p.P452P;refseq.proteinCoordStr_5=p.P452R;refseq.proteinCoordStr_6=p.P452R;refseq.proteinCoordStr_7=p.P452L;refseq.proteinCoordStr_8=p.P452L;refseq.referenceAA_1=Pro;refseq.referenceAA_2=Pro;refseq.referenceAA_3=Pro;refseq.referenceAA_4=Pro;refseq.referenceAA_5=Pro;refseq.referenceAA_6=Pro;refseq.referenceAA_7=Pro;refseq.referenceAA_8=Pro;refseq.referenceCodon_1=CCG;refseq.referenceCodon_2=CCG;refseq.referenceCodon_3=CCG;refseq.referenceCodon_4=CCG;refseq.referenceCodon_5=CCG;refseq.referenceCodon_6=CCG;refseq.referenceCodon_7=CCG;refseq.referenceCodon_8=CCG;refseq.spliceDist_1=-289;refseq.spliceDist_2=-289;refseq.spliceDist_3=-289;refseq.spliceDist_4=-289;refseq.spliceDist_5=-289;refseq.spliceDist_6=-289;refseq.spliceDist_7=-289;refseq.spliceDist_8=-289;refseq.start_1=10030572;refseq.start_2=10030572;refseq.start_3=10030572;refseq.start_4=10030572;refseq.start_5=10030572;refseq.start_6=10030572;refseq.start_7=10030572;refseq.start_8=10030572;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Gln;refseq.variantAA_2=Gln;refseq.variantAA_3=Pro;refseq.variantAA_4=Pro;refseq.variantAA_5=Arg;refseq.variantAA_6=Arg;refseq.variantAA_7=Leu;refseq.variantAA_8=Leu;refseq.variantCodon_1=CAG;refseq.variantCodon_2=CAG;refseq.variantCodon_3=CCG;refseq.variantCodon_4=CCG;refseq.variantCodon_5=CGG;refseq.variantCodon_6=CGG;refseq.variantCodon_7=CTG;refseq.variantCodon_8=CTG GT:DP:GQ:PL 0/0:3:9:0,9,94 0/0:6:18:0,18,191 ./.
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|
20 10030617 . G . 66.04 PASS AC=0;AF=0.00;AN=4;DP=11;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1400G>A;refseq.codingCoordStr_2=c.1400G>A;refseq.codingCoordStr_3=c.1400G>C;refseq.codingCoordStr_4=c.1400G>C;refseq.codingCoordStr_5=c.1400G>G;refseq.codingCoordStr_6=c.1400G>G;refseq.codingCoordStr_7=c.1400G>T;refseq.codingCoordStr_8=c.1400G>T;refseq.codonCoord_1=467;refseq.codonCoord_2=467;refseq.codonCoord_3=467;refseq.codonCoord_4=467;refseq.codonCoord_5=467;refseq.codonCoord_6=467;refseq.codonCoord_7=467;refseq.codonCoord_8=467;refseq.end_1=10030617;refseq.end_2=10030617;refseq.end_3=10030617;refseq.end_4=10030617;refseq.end_5=10030617;refseq.end_6=10030617;refseq.end_7=10030617;refseq.end_8=10030617;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1793;refseq.mrnaCoord_2=1729;refseq.mrnaCoord_3=1793;refseq.mrnaCoord_4=1729;refseq.mrnaCoord_5=1793;refseq.mrnaCoord_6=1729;refseq.mrnaCoord_7=1793;refseq.mrnaCoord_8=1729;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.R467Q;refseq.proteinCoordStr_2=p.R467Q;refseq.proteinCoordStr_3=p.R467P;refseq.proteinCoordStr_4=p.R467P;refseq.proteinCoordStr_5=p.R467R;refseq.proteinCoordStr_6=p.R467R;refseq.proteinCoordStr_7=p.R467L;refseq.proteinCoordStr_8=p.R467L;refseq.referenceAA_1=Arg;refseq.referenceAA_2=Arg;refseq.referenceAA_3=Arg;refseq.referenceAA_4=Arg;refseq.referenceAA_5=Arg;refseq.referenceAA_6=Arg;refseq.referenceAA_7=Arg;refseq.referenceAA_8=Arg;refseq.referenceCodon_1=CGG;refseq.referenceCodon_2=CGG;refseq.referenceCodon_3=CGG;refseq.referenceCodon_4=CGG;refseq.referenceCodon_5=CGG;refseq.referenceCodon_6=CGG;refseq.referenceCodon_7=CGG;refseq.referenceCodon_8=CGG;refseq.spliceDist_1=-244;refseq.spliceDist_2=-244;refseq.spliceDist_3=-244;refseq.spliceDist_4=-244;refseq.spliceDist_5=-244;refseq.spliceDist_6=-244;refseq.spliceDist_7=-244;refseq.spliceDist_8=-244;refseq.start_1=10030617;refseq.start_2=10030617;refseq.start_3=10030617;refseq.start_4=10030617;refseq.start_5=10030617;refseq.start_6=10030617;refseq.start_7=10030617;refseq.start_8=10030617;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Gln;refseq.variantAA_2=Gln;refseq.variantAA_3=Pro;refseq.variantAA_4=Pro;refseq.variantAA_5=Arg;refseq.variantAA_6=Arg;refseq.variantAA_7=Leu;refseq.variantAA_8=Leu;refseq.variantCodon_1=CAG;refseq.variantCodon_2=CAG;refseq.variantCodon_3=CCG;refseq.variantCodon_4=CCG;refseq.variantCodon_5=CGG;refseq.variantCodon_6=CGG;refseq.variantCodon_7=CTG;refseq.variantCodon_8=CTG GT:DP:GQ:PL 0/0:6:18:0,18,172 0/0:5:15:0,15,144 ./.
|
|
20 10030776 . T . 58.41 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1559T>A;refseq.codingCoordStr_2=c.1559T>A;refseq.codingCoordStr_3=c.1559T>C;refseq.codingCoordStr_4=c.1559T>C;refseq.codingCoordStr_5=c.1559T>G;refseq.codingCoordStr_6=c.1559T>G;refseq.codingCoordStr_7=c.1559T>T;refseq.codingCoordStr_8=c.1559T>T;refseq.codonCoord_1=520;refseq.codonCoord_2=520;refseq.codonCoord_3=520;refseq.codonCoord_4=520;refseq.codonCoord_5=520;refseq.codonCoord_6=520;refseq.codonCoord_7=520;refseq.codonCoord_8=520;refseq.end_1=10030776;refseq.end_2=10030776;refseq.end_3=10030776;refseq.end_4=10030776;refseq.end_5=10030776;refseq.end_6=10030776;refseq.end_7=10030776;refseq.end_8=10030776;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=1952;refseq.mrnaCoord_2=1888;refseq.mrnaCoord_3=1952;refseq.mrnaCoord_4=1888;refseq.mrnaCoord_5=1952;refseq.mrnaCoord_6=1888;refseq.mrnaCoord_7=1952;refseq.mrnaCoord_8=1888;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.M520K;refseq.proteinCoordStr_2=p.M520K;refseq.proteinCoordStr_3=p.M520T;refseq.proteinCoordStr_4=p.M520T;refseq.proteinCoordStr_5=p.M520R;refseq.proteinCoordStr_6=p.M520R;refseq.proteinCoordStr_7=p.M520M;refseq.proteinCoordStr_8=p.M520M;refseq.referenceAA_1=Met;refseq.referenceAA_2=Met;refseq.referenceAA_3=Met;refseq.referenceAA_4=Met;refseq.referenceAA_5=Met;refseq.referenceAA_6=Met;refseq.referenceAA_7=Met;refseq.referenceAA_8=Met;refseq.referenceCodon_1=ATG;refseq.referenceCodon_2=ATG;refseq.referenceCodon_3=ATG;refseq.referenceCodon_4=ATG;refseq.referenceCodon_5=ATG;refseq.referenceCodon_6=ATG;refseq.referenceCodon_7=ATG;refseq.referenceCodon_8=ATG;refseq.spliceDist_1=-85;refseq.spliceDist_2=-85;refseq.spliceDist_3=-85;refseq.spliceDist_4=-85;refseq.spliceDist_5=-85;refseq.spliceDist_6=-85;refseq.spliceDist_7=-85;refseq.spliceDist_8=-85;refseq.start_1=10030776;refseq.start_2=10030776;refseq.start_3=10030776;refseq.start_4=10030776;refseq.start_5=10030776;refseq.start_6=10030776;refseq.start_7=10030776;refseq.start_8=10030776;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Lys;refseq.variantAA_2=Lys;refseq.variantAA_3=Thr;refseq.variantAA_4=Thr;refseq.variantAA_5=Arg;refseq.variantAA_6=Arg;refseq.variantAA_7=Met;refseq.variantAA_8=Met;refseq.variantCodon_1=AAG;refseq.variantCodon_2=AAG;refseq.variantCodon_3=ACG;refseq.variantCodon_4=ACG;refseq.variantCodon_5=AGG;refseq.variantCodon_6=AGG;refseq.variantCodon_7=ATG;refseq.variantCodon_8=ATG GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:9:27:0,27,290 0/0:3:9:0,9,103
|
|
20 10030931 rs656111 C A 58749.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=8;HAPMAP;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,163 0/0:2:6:0,6,62 1/1:1:3:36,3,0
|
|
20 10031011 . A . 30.19 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=6;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:2:6:0,6,79 ./.
|
|
20 10031079 . G . 11.36 PASS AC=0;AF=0.00;AN=6;DP=9;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:2:6:0,6,55 0/0:1:3:0,3,36
|
|
20 10031138 rs6141102 A G 27390.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=7;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:3:24:24,0,62 0/0:3:6:0,6,81 1/1:1:3:35,3,0
|
|
20 10031342 rs668091 G A 70016.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=7;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:5:50:50,0,85 0/0:2:6:0,6,66 ./.
|
|
20 10031465 rs79641121 A . 758.03 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,253 0/0:6:18:0,18,190 0/0:2:6:0,6,68
|
|
20 10031510 . C . 44 PASS AC=0;AF=0.00;AN=6;DP=22;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:10:30:0,30,345 0/0:6:18:0,18,200 0/0:6:18:0,18,198
|
|
20 10031606 . A . 233.29 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:3:9:0,9,92 0/0:2:6:0,6,76
|
|
20 10031778 . A . 611.72 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:2:6:0,6,73 0/0:8:24:0,24,288
|
|
20 10031798 rs669985 G A 128976.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 1/1:6:18:214,18,0 1/1:2:6:75,6,0 1/1:9:27:311,27,0
|
|
20 10031827 rs558493 C . 17919.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:4:12:0,12,139 0/0:5:15:0,15,156
|
|
20 10032094 rs681750 G . 19986.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=20;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,209 0/0:4:12:0,12,124 0/0:9:27:0,27,274
|
|
20 10032283 . T . 163.58 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:6:18:0,18,198 0/0:5:15:0,15,178
|
|
20 10032289 . G . 57.72 PASS AC=0;AF=0.00;AN=6;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10032300;refseq.end_2=10032300;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10030871;refseq.start_2=10030871;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,169 0/0:8:24:0,24,279 0/0:5:15:0,15,179
|
|
20 10032413 rs683145 T . 19331.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=24;HAPMAP;OMNI;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1746T>A;refseq.codingCoordStr_2=c.1746T>A;refseq.codingCoordStr_3=c.1746T>C;refseq.codingCoordStr_4=c.1746T>C;refseq.codingCoordStr_5=c.1746T>G;refseq.codingCoordStr_6=c.1746T>G;refseq.codingCoordStr_7=c.1746T>T;refseq.codingCoordStr_8=c.1746T>T;refseq.codonCoord_1=582;refseq.codonCoord_2=582;refseq.codonCoord_3=582;refseq.codonCoord_4=582;refseq.codonCoord_5=582;refseq.codonCoord_6=582;refseq.codonCoord_7=582;refseq.codonCoord_8=582;refseq.end_1=10032413;refseq.end_2=10032413;refseq.end_3=10032413;refseq.end_4=10032413;refseq.end_5=10032413;refseq.end_6=10032413;refseq.end_7=10032413;refseq.end_8=10032413;refseq.frame_1=2;refseq.frame_2=2;refseq.frame_3=2;refseq.frame_4=2;refseq.frame_5=2;refseq.frame_6=2;refseq.frame_7=2;refseq.frame_8=2;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=2139;refseq.mrnaCoord_2=2075;refseq.mrnaCoord_3=2139;refseq.mrnaCoord_4=2075;refseq.mrnaCoord_5=2139;refseq.mrnaCoord_6=2075;refseq.mrnaCoord_7=2139;refseq.mrnaCoord_8=2075;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.A582A;refseq.proteinCoordStr_2=p.A582A;refseq.proteinCoordStr_3=p.A582A;refseq.proteinCoordStr_4=p.A582A;refseq.proteinCoordStr_5=p.A582A;refseq.proteinCoordStr_6=p.A582A;refseq.proteinCoordStr_7=p.A582A;refseq.proteinCoordStr_8=p.A582A;refseq.referenceAA_1=Ala;refseq.referenceAA_2=Ala;refseq.referenceAA_3=Ala;refseq.referenceAA_4=Ala;refseq.referenceAA_5=Ala;refseq.referenceAA_6=Ala;refseq.referenceAA_7=Ala;refseq.referenceAA_8=Ala;refseq.referenceCodon_1=GCT;refseq.referenceCodon_2=GCT;refseq.referenceCodon_3=GCT;refseq.referenceCodon_4=GCT;refseq.referenceCodon_5=GCT;refseq.referenceCodon_6=GCT;refseq.referenceCodon_7=GCT;refseq.referenceCodon_8=GCT;refseq.spliceDist_1=103;refseq.spliceDist_2=103;refseq.spliceDist_3=103;refseq.spliceDist_4=103;refseq.spliceDist_5=103;refseq.spliceDist_6=103;refseq.spliceDist_7=103;refseq.spliceDist_8=103;refseq.start_1=10032413;refseq.start_2=10032413;refseq.start_3=10032413;refseq.start_4=10032413;refseq.start_5=10032413;refseq.start_6=10032413;refseq.start_7=10032413;refseq.start_8=10032413;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Ala;refseq.variantAA_2=Ala;refseq.variantAA_3=Ala;refseq.variantAA_4=Ala;refseq.variantAA_5=Ala;refseq.variantAA_6=Ala;refseq.variantAA_7=Ala;refseq.variantAA_8=Ala;refseq.variantCodon_1=GCA;refseq.variantCodon_2=GCA;refseq.variantCodon_3=GCC;refseq.variantCodon_4=GCC;refseq.variantCodon_5=GCG;refseq.variantCodon_6=GCG;refseq.variantCodon_7=GCT;refseq.variantCodon_8=GCT GT:DP:GQ:PL 0/0:7:21:0,21,252 0/0:12:36:0,36,437 0/0:5:15:0,15,189
|
|
20 10032432 rs78089752 A . 367.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18;OMNI;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.1765A>A;refseq.codingCoordStr_2=c.1765A>A;refseq.codingCoordStr_3=c.1765A>C;refseq.codingCoordStr_4=c.1765A>C;refseq.codingCoordStr_5=c.1765A>G;refseq.codingCoordStr_6=c.1765A>G;refseq.codingCoordStr_7=c.1765A>T;refseq.codingCoordStr_8=c.1765A>T;refseq.codonCoord_1=589;refseq.codonCoord_2=589;refseq.codonCoord_3=589;refseq.codonCoord_4=589;refseq.codonCoord_5=589;refseq.codonCoord_6=589;refseq.codonCoord_7=589;refseq.codonCoord_8=589;refseq.end_1=10032432;refseq.end_2=10032432;refseq.end_3=10032432;refseq.end_4=10032432;refseq.end_5=10032432;refseq.end_6=10032432;refseq.end_7=10032432;refseq.end_8=10032432;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.haplotypeReference_3=A;refseq.haplotypeReference_4=A;refseq.haplotypeReference_5=A;refseq.haplotypeReference_6=A;refseq.haplotypeReference_7=A;refseq.haplotypeReference_8=A;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=2158;refseq.mrnaCoord_2=2094;refseq.mrnaCoord_3=2158;refseq.mrnaCoord_4=2094;refseq.mrnaCoord_5=2158;refseq.mrnaCoord_6=2094;refseq.mrnaCoord_7=2158;refseq.mrnaCoord_8=2094;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.I589I;refseq.proteinCoordStr_2=p.I589I;refseq.proteinCoordStr_3=p.I589L;refseq.proteinCoordStr_4=p.I589L;refseq.proteinCoordStr_5=p.I589V;refseq.proteinCoordStr_6=p.I589V;refseq.proteinCoordStr_7=p.I589F;refseq.proteinCoordStr_8=p.I589F;refseq.referenceAA_1=Ile;refseq.referenceAA_2=Ile;refseq.referenceAA_3=Ile;refseq.referenceAA_4=Ile;refseq.referenceAA_5=Ile;refseq.referenceAA_6=Ile;refseq.referenceAA_7=Ile;refseq.referenceAA_8=Ile;refseq.referenceCodon_1=ATC;refseq.referenceCodon_2=ATC;refseq.referenceCodon_3=ATC;refseq.referenceCodon_4=ATC;refseq.referenceCodon_5=ATC;refseq.referenceCodon_6=ATC;refseq.referenceCodon_7=ATC;refseq.referenceCodon_8=ATC;refseq.spliceDist_1=-106;refseq.spliceDist_2=-106;refseq.spliceDist_3=-106;refseq.spliceDist_4=-106;refseq.spliceDist_5=-106;refseq.spliceDist_6=-106;refseq.spliceDist_7=-106;refseq.spliceDist_8=-106;refseq.start_1=10032432;refseq.start_2=10032432;refseq.start_3=10032432;refseq.start_4=10032432;refseq.start_5=10032432;refseq.start_6=10032432;refseq.start_7=10032432;refseq.start_8=10032432;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Ile;refseq.variantAA_2=Ile;refseq.variantAA_3=Leu;refseq.variantAA_4=Leu;refseq.variantAA_5=Val;refseq.variantAA_6=Val;refseq.variantAA_7=Phe;refseq.variantAA_8=Phe;refseq.variantCodon_1=ATC;refseq.variantCodon_2=ATC;refseq.variantCodon_3=CTC;refseq.variantCodon_4=CTC;refseq.variantCodon_5=GTC;refseq.variantCodon_6=GTC;refseq.variantCodon_7=TTC;refseq.variantCodon_8=TTC GT:DP:GQ:PL 0/0:5:15:0,15,175 0/0:8:24:0,24,293 0/0:5:15:0,15,182
|
|
20 10032605 . C . 24.43 PASS AC=0;AF=0.00;AN=6;DP=21;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,164 0/0:13:39:0,39,429 0/0:3:9:0,9,110
|
|
20 10032641 rs6141103 G C 21793.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:4:19:80,0,19 0/0:10:30:0,30,354 1/1:3:9:104,9,0
|
|
20 10032665 rs77625482 A . 5.62 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,110 0/0:10:30:0,30,367 0/0:5:15:0,15,180
|
|
20 10032856 . T . 124.78 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:6:18:0,18,218 0/0:4:12:0,12,138
|
|
20 10032882 rs479039 A T 61968.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:5:59:91,0,59 0/0:6:18:0,18,196 1/1:5:15:176,15,0
|
|
20 10032942 . C . 235.15 PASS AC=0;AF=0.00;AN=6;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,233 0/0:6:18:0,18,207 0/0:5:15:0,15,178
|
|
20 10032962 rs116231007 G . 771.61 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,206 0/0:6:18:0,18,206 0/0:3:9:0,9,107
|
|
20 10033147 . A . 34.01 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:8:24:0,24,282 0/0:5:15:0,15,166 0/0:1:3:0,3,37
|
|
20 10033581 . G . 25.31 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,209 0/0:9:27:0,27,301 0/0:2:6:0,6,76
|
|
20 10033611 . A . 44.20 PASS AC=0;AF=0.00;AN=6;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10033749;refseq.end_2=10033749;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10032548;refseq.start_2=10032548;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:5:15:0,15,173 0/0:3:9:0,9,105
|
|
20 10034094 . T . 291.04 PASS AC=0;AF=0.00;AN=6;DP=14;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,182 0/0:5:15:0,15,177 0/0:4:12:0,12,144
|
|
20 10034184 . G . 389.60 PASS AC=0;AF=0.00;AN=6;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,148 0/0:8:24:0,24,261 0/0:5:15:0,15,171
|
|
20 10034189 . A . 83.94 PASS AC=0;AF=0.00;AN=6;DP=21;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,198 0/0:9:27:0,27,285 0/0:6:18:0,18,218
|
|
20 10034306 rs604452 T . 20951.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=20;HAPMAP;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:10:30:0,30,345 0/0:4:12:0,12,137
|
|
20 10034425 rs535296 C T 58992.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=13;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/1:4:24:24,0,86 0/1:8:14:14,0,193 1/1:1:3:38,3,0
|
|
20 10034462 . G . 268.20 PASS AC=0;AF=0.00;AN=6;DP=19;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,204 0/0:11:33:0,33,365 0/0:2:6:0,6,65
|
|
20 10034491 . A . 92.29 PASS AC=0;AF=0.00;AN=6;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:10:2.12:2,0,282 0/0:3:9:0,9,109
|
|
20 10034493 . T . 49.93 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:11:33:0,33,374 0/0:3:9:0,9,94
|
|
20 10034689 rs111959341 T . 22.88 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,217 0/0:8:24:0,24,275 0/0:3:9:0,9,112
|
|
20 10034698 . T . 528.78 PASS AC=0;AF=0.00;AN=6;DP=18;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,243 0/0:8:24:0,24,283 0/0:3:9:0,9,113
|
|
20 10034729 rs117230539 G . 25.62 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:9:27:0,27,311 0/0:3:9:0,9,108
|
|
20 10034918 . A . 35.76 PASS AC=0;AF=0.00;AN=4;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10035099;refseq.end_2=10035099;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10033934;refseq.start_2=10033934;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:7:21:0,21,254 0/0:4:12:0,12,141 ./.
|
|
20 10035242 . C . 47.87 PASS AC=0;AF=0.00;AN=6;DP=5;refseq.changesAA_1=false;refseq.changesAA_2=false;refseq.changesAA_3=false;refseq.changesAA_4=false;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.2167C>A;refseq.codingCoordStr_2=c.2167C>A;refseq.codingCoordStr_3=c.2167C>C;refseq.codingCoordStr_4=c.2167C>C;refseq.codingCoordStr_5=c.2167C>G;refseq.codingCoordStr_6=c.2167C>G;refseq.codingCoordStr_7=c.2167C>T;refseq.codingCoordStr_8=c.2167C>T;refseq.codonCoord_1=723;refseq.codonCoord_2=723;refseq.codonCoord_3=723;refseq.codonCoord_4=723;refseq.codonCoord_5=723;refseq.codonCoord_6=723;refseq.codonCoord_7=723;refseq.codonCoord_8=723;refseq.end_1=10035242;refseq.end_2=10035242;refseq.end_3=10035242;refseq.end_4=10035242;refseq.end_5=10035242;refseq.end_6=10035242;refseq.end_7=10035242;refseq.end_8=10035242;refseq.frame_1=0;refseq.frame_2=0;refseq.frame_3=0;refseq.frame_4=0;refseq.frame_5=0;refseq.frame_6=0;refseq.frame_7=0;refseq.frame_8=0;refseq.functionalClass_1=silent;refseq.functionalClass_2=silent;refseq.functionalClass_3=silent;refseq.functionalClass_4=silent;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=2560;refseq.mrnaCoord_2=2496;refseq.mrnaCoord_3=2560;refseq.mrnaCoord_4=2496;refseq.mrnaCoord_5=2560;refseq.mrnaCoord_6=2496;refseq.mrnaCoord_7=2560;refseq.mrnaCoord_8=2496;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.R723R;refseq.proteinCoordStr_2=p.R723R;refseq.proteinCoordStr_3=p.R723R;refseq.proteinCoordStr_4=p.R723R;refseq.proteinCoordStr_5=p.R723G;refseq.proteinCoordStr_6=p.R723G;refseq.proteinCoordStr_7=p.R723W;refseq.proteinCoordStr_8=p.R723W;refseq.referenceAA_1=Arg;refseq.referenceAA_2=Arg;refseq.referenceAA_3=Arg;refseq.referenceAA_4=Arg;refseq.referenceAA_5=Arg;refseq.referenceAA_6=Arg;refseq.referenceAA_7=Arg;refseq.referenceAA_8=Arg;refseq.referenceCodon_1=CGG;refseq.referenceCodon_2=CGG;refseq.referenceCodon_3=CGG;refseq.referenceCodon_4=CGG;refseq.referenceCodon_5=CGG;refseq.referenceCodon_6=CGG;refseq.referenceCodon_7=CGG;refseq.referenceCodon_8=CGG;refseq.spliceDist_1=-6;refseq.spliceDist_2=-6;refseq.spliceDist_3=-6;refseq.spliceDist_4=-6;refseq.spliceDist_5=-6;refseq.spliceDist_6=-6;refseq.spliceDist_7=-6;refseq.spliceDist_8=-6;refseq.spliceInfo_1=splice-donor_-6;refseq.spliceInfo_2=splice-donor_-6;refseq.spliceInfo_3=splice-donor_-6;refseq.spliceInfo_4=splice-donor_-6;refseq.spliceInfo_5=splice-donor_-6;refseq.spliceInfo_6=splice-donor_-6;refseq.spliceInfo_7=splice-donor_-6;refseq.spliceInfo_8=splice-donor_-6;refseq.start_1=10035242;refseq.start_2=10035242;refseq.start_3=10035242;refseq.start_4=10035242;refseq.start_5=10035242;refseq.start_6=10035242;refseq.start_7=10035242;refseq.start_8=10035242;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Arg;refseq.variantAA_2=Arg;refseq.variantAA_3=Arg;refseq.variantAA_4=Arg;refseq.variantAA_5=Gly;refseq.variantAA_6=Gly;refseq.variantAA_7=Trp;refseq.variantAA_8=Trp;refseq.variantCodon_1=AGG;refseq.variantCodon_2=AGG;refseq.variantCodon_3=CGG;refseq.variantCodon_4=CGG;refseq.variantCodon_5=GGG;refseq.variantCodon_6=GGG;refseq.variantCodon_7=TGG;refseq.variantCodon_8=TGG GT:DP:GQ:PL 0/0:2:6:0,6,54 0/0:2:6:0,6,63 0/0:1:3:0,3,31
|
|
20 10035258 . C . 768.46 PASS AC=0;AF=0.00;AN=6;DP=5;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,62 0/0:1:3:0,3,27 0/0:2:6:0,6,70
|
|
20 10035290 . T . 113.44 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:5:15:0,15,175 0/0:1:3:0,3,38
|
|
20 10035425 rs6057116 T . 395.37 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:2:6:0,6,72 0/0:3:9:0,9,92
|
|
20 10035752 . G . 61.29 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,112 0/0:4:9:0,9,104 0/0:2:6:0,6,69
|
|
20 10035935 rs79067738 A . 68.78 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,103 0/0:2:6:0,6,64
|
|
20 10035983 . G . 137.29 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:3:9:0,9,95 0/0:1:3:0,3,33 0/0:4:12:0,12,145
|
|
20 10036024 . G . 212.79 PASS AC=0;AF=0.00;AN=6;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:6:18:0,18,198 0/0:4:12:0,12,134 0/0:6:18:0,18,208
|
|
20 10036031 . G . 129.91 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.end_1=10036139;refseq.end_2=10036139;refseq.haplotypeReference_1=*;refseq.haplotypeReference_2=*;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=intron;refseq.positionType_2=intron;refseq.start_1=10035258;refseq.start_2=10035258;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:5:15:0,15,166 0/0:6:18:0,18,197
|
|
20 10036151 . T . 282.69 PASS AC=0;AF=0.00;AN=6;DP=7;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=true;refseq.changesAA_6=true;refseq.changesAA_7=false;refseq.changesAA_8=false;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.2174T>A;refseq.codingCoordStr_2=c.2174T>A;refseq.codingCoordStr_3=c.2174T>C;refseq.codingCoordStr_4=c.2174T>C;refseq.codingCoordStr_5=c.2174T>G;refseq.codingCoordStr_6=c.2174T>G;refseq.codingCoordStr_7=c.2174T>T;refseq.codingCoordStr_8=c.2174T>T;refseq.codonCoord_1=725;refseq.codonCoord_2=725;refseq.codonCoord_3=725;refseq.codonCoord_4=725;refseq.codonCoord_5=725;refseq.codonCoord_6=725;refseq.codonCoord_7=725;refseq.codonCoord_8=725;refseq.end_1=10036151;refseq.end_2=10036151;refseq.end_3=10036151;refseq.end_4=10036151;refseq.end_5=10036151;refseq.end_6=10036151;refseq.end_7=10036151;refseq.end_8=10036151;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=missense;refseq.functionalClass_6=missense;refseq.functionalClass_7=silent;refseq.functionalClass_8=silent;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=2567;refseq.mrnaCoord_2=2503;refseq.mrnaCoord_3=2567;refseq.mrnaCoord_4=2503;refseq.mrnaCoord_5=2567;refseq.mrnaCoord_6=2503;refseq.mrnaCoord_7=2567;refseq.mrnaCoord_8=2503;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.I725N;refseq.proteinCoordStr_2=p.I725N;refseq.proteinCoordStr_3=p.I725T;refseq.proteinCoordStr_4=p.I725T;refseq.proteinCoordStr_5=p.I725S;refseq.proteinCoordStr_6=p.I725S;refseq.proteinCoordStr_7=p.I725I;refseq.proteinCoordStr_8=p.I725I;refseq.referenceAA_1=Ile;refseq.referenceAA_2=Ile;refseq.referenceAA_3=Ile;refseq.referenceAA_4=Ile;refseq.referenceAA_5=Ile;refseq.referenceAA_6=Ile;refseq.referenceAA_7=Ile;refseq.referenceAA_8=Ile;refseq.referenceCodon_1=ATT;refseq.referenceCodon_2=ATT;refseq.referenceCodon_3=ATT;refseq.referenceCodon_4=ATT;refseq.referenceCodon_5=ATT;refseq.referenceCodon_6=ATT;refseq.referenceCodon_7=ATT;refseq.referenceCodon_8=ATT;refseq.spliceDist_1=2;refseq.spliceDist_2=2;refseq.spliceDist_3=2;refseq.spliceDist_4=2;refseq.spliceDist_5=2;refseq.spliceDist_6=2;refseq.spliceDist_7=2;refseq.spliceDist_8=2;refseq.spliceInfo_1=splice-acceptor_2;refseq.spliceInfo_2=splice-acceptor_2;refseq.spliceInfo_3=splice-acceptor_2;refseq.spliceInfo_4=splice-acceptor_2;refseq.spliceInfo_5=splice-acceptor_2;refseq.spliceInfo_6=splice-acceptor_2;refseq.spliceInfo_7=splice-acceptor_2;refseq.spliceInfo_8=splice-acceptor_2;refseq.start_1=10036151;refseq.start_2=10036151;refseq.start_3=10036151;refseq.start_4=10036151;refseq.start_5=10036151;refseq.start_6=10036151;refseq.start_7=10036151;refseq.start_8=10036151;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Asn;refseq.variantAA_2=Asn;refseq.variantAA_3=Thr;refseq.variantAA_4=Thr;refseq.variantAA_5=Ser;refseq.variantAA_6=Ser;refseq.variantAA_7=Ile;refseq.variantAA_8=Ile;refseq.variantCodon_1=AAT;refseq.variantCodon_2=AAT;refseq.variantCodon_3=ACT;refseq.variantCodon_4=ACT;refseq.variantCodon_5=AGT;refseq.variantCodon_6=AGT;refseq.variantCodon_7=ATT;refseq.variantCodon_8=ATT GT:DP:GQ:PL 0/0:3:9:0,9,109 0/0:2:6:0,6,73 0/0:2:6:0,6,69
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|
20 10036202 rs6087119 G . 6343.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;HAPMAP;OMNI;refseq.changesAA_1=true;refseq.changesAA_2=true;refseq.changesAA_3=true;refseq.changesAA_4=true;refseq.changesAA_5=false;refseq.changesAA_6=false;refseq.changesAA_7=true;refseq.changesAA_8=true;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.2225G>A;refseq.codingCoordStr_2=c.2225G>A;refseq.codingCoordStr_3=c.2225G>C;refseq.codingCoordStr_4=c.2225G>C;refseq.codingCoordStr_5=c.2225G>G;refseq.codingCoordStr_6=c.2225G>G;refseq.codingCoordStr_7=c.2225G>T;refseq.codingCoordStr_8=c.2225G>T;refseq.codonCoord_1=742;refseq.codonCoord_2=742;refseq.codonCoord_3=742;refseq.codonCoord_4=742;refseq.codonCoord_5=742;refseq.codonCoord_6=742;refseq.codonCoord_7=742;refseq.codonCoord_8=742;refseq.end_1=10036202;refseq.end_2=10036202;refseq.end_3=10036202;refseq.end_4=10036202;refseq.end_5=10036202;refseq.end_6=10036202;refseq.end_7=10036202;refseq.end_8=10036202;refseq.frame_1=1;refseq.frame_2=1;refseq.frame_3=1;refseq.frame_4=1;refseq.frame_5=1;refseq.frame_6=1;refseq.frame_7=1;refseq.frame_8=1;refseq.functionalClass_1=missense;refseq.functionalClass_2=missense;refseq.functionalClass_3=missense;refseq.functionalClass_4=missense;refseq.functionalClass_5=silent;refseq.functionalClass_6=silent;refseq.functionalClass_7=missense;refseq.functionalClass_8=missense;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=true;refseq.inCodingRegion_2=true;refseq.inCodingRegion_3=true;refseq.inCodingRegion_4=true;refseq.inCodingRegion_5=true;refseq.inCodingRegion_6=true;refseq.inCodingRegion_7=true;refseq.inCodingRegion_8=true;refseq.mrnaCoord_1=2618;refseq.mrnaCoord_2=2554;refseq.mrnaCoord_3=2618;refseq.mrnaCoord_4=2554;refseq.mrnaCoord_5=2618;refseq.mrnaCoord_6=2554;refseq.mrnaCoord_7=2618;refseq.mrnaCoord_8=2554;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=CDS;refseq.positionType_2=CDS;refseq.positionType_3=CDS;refseq.positionType_4=CDS;refseq.positionType_5=CDS;refseq.positionType_6=CDS;refseq.positionType_7=CDS;refseq.positionType_8=CDS;refseq.proteinCoordStr_1=p.R742Q;refseq.proteinCoordStr_2=p.R742Q;refseq.proteinCoordStr_3=p.R742P;refseq.proteinCoordStr_4=p.R742P;refseq.proteinCoordStr_5=p.R742R;refseq.proteinCoordStr_6=p.R742R;refseq.proteinCoordStr_7=p.R742L;refseq.proteinCoordStr_8=p.R742L;refseq.referenceAA_1=Arg;refseq.referenceAA_2=Arg;refseq.referenceAA_3=Arg;refseq.referenceAA_4=Arg;refseq.referenceAA_5=Arg;refseq.referenceAA_6=Arg;refseq.referenceAA_7=Arg;refseq.referenceAA_8=Arg;refseq.referenceCodon_1=CGG;refseq.referenceCodon_2=CGG;refseq.referenceCodon_3=CGG;refseq.referenceCodon_4=CGG;refseq.referenceCodon_5=CGG;refseq.referenceCodon_6=CGG;refseq.referenceCodon_7=CGG;refseq.referenceCodon_8=CGG;refseq.spliceDist_1=53;refseq.spliceDist_2=53;refseq.spliceDist_3=53;refseq.spliceDist_4=53;refseq.spliceDist_5=53;refseq.spliceDist_6=53;refseq.spliceDist_7=53;refseq.spliceDist_8=53;refseq.start_1=10036202;refseq.start_2=10036202;refseq.start_3=10036202;refseq.start_4=10036202;refseq.start_5=10036202;refseq.start_6=10036202;refseq.start_7=10036202;refseq.start_8=10036202;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+;refseq.variantAA_1=Gln;refseq.variantAA_2=Gln;refseq.variantAA_3=Pro;refseq.variantAA_4=Pro;refseq.variantAA_5=Arg;refseq.variantAA_6=Arg;refseq.variantAA_7=Leu;refseq.variantAA_8=Leu;refseq.variantCodon_1=CAG;refseq.variantCodon_2=CAG;refseq.variantCodon_3=CCG;refseq.variantCodon_4=CCG;refseq.variantCodon_5=CGG;refseq.variantCodon_6=CGG;refseq.variantCodon_7=CTG;refseq.variantCodon_8=CTG GT:DP:GQ:PL 0/0:8:24:0,24,235 0/0:2:6:0,6,56 0/0:2:6:0,6,65
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|
20 10036424 . G . 6.76 PASS AC=0;AF=0.00;AN=6;DP=15;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*116G>A;refseq.codingCoordStr_2=c.*116G>A;refseq.codingCoordStr_3=c.*116G>C;refseq.codingCoordStr_4=c.*116G>C;refseq.codingCoordStr_5=c.*116G>G;refseq.codingCoordStr_6=c.*116G>G;refseq.codingCoordStr_7=c.*116G>T;refseq.codingCoordStr_8=c.*116G>T;refseq.end_1=10036424;refseq.end_2=10036424;refseq.end_3=10036424;refseq.end_4=10036424;refseq.end_5=10036424;refseq.end_6=10036424;refseq.end_7=10036424;refseq.end_8=10036424;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=2840;refseq.mrnaCoord_2=2776;refseq.mrnaCoord_3=2840;refseq.mrnaCoord_4=2776;refseq.mrnaCoord_5=2840;refseq.mrnaCoord_6=2776;refseq.mrnaCoord_7=2840;refseq.mrnaCoord_8=2776;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=275;refseq.spliceDist_2=275;refseq.spliceDist_3=275;refseq.spliceDist_4=275;refseq.spliceDist_5=275;refseq.spliceDist_6=275;refseq.spliceDist_7=275;refseq.spliceDist_8=275;refseq.start_1=10036424;refseq.start_2=10036424;refseq.start_3=10036424;refseq.start_4=10036424;refseq.start_5=10036424;refseq.start_6=10036424;refseq.start_7=10036424;refseq.start_8=10036424;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:3:9:0,9,98 0/0:7:21:0,21,244
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20 10036434 rs6087120 T . 5844.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*126T>A;refseq.codingCoordStr_2=c.*126T>A;refseq.codingCoordStr_3=c.*126T>C;refseq.codingCoordStr_4=c.*126T>C;refseq.codingCoordStr_5=c.*126T>G;refseq.codingCoordStr_6=c.*126T>G;refseq.codingCoordStr_7=c.*126T>T;refseq.codingCoordStr_8=c.*126T>T;refseq.end_1=10036434;refseq.end_2=10036434;refseq.end_3=10036434;refseq.end_4=10036434;refseq.end_5=10036434;refseq.end_6=10036434;refseq.end_7=10036434;refseq.end_8=10036434;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=2850;refseq.mrnaCoord_2=2786;refseq.mrnaCoord_3=2850;refseq.mrnaCoord_4=2786;refseq.mrnaCoord_5=2850;refseq.mrnaCoord_6=2786;refseq.mrnaCoord_7=2850;refseq.mrnaCoord_8=2786;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=285;refseq.spliceDist_2=285;refseq.spliceDist_3=285;refseq.spliceDist_4=285;refseq.spliceDist_5=285;refseq.spliceDist_6=285;refseq.spliceDist_7=285;refseq.spliceDist_8=285;refseq.start_1=10036434;refseq.start_2=10036434;refseq.start_3=10036434;refseq.start_4=10036434;refseq.start_5=10036434;refseq.start_6=10036434;refseq.start_7=10036434;refseq.start_8=10036434;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:7:21:0,21,253 0/0:3:9:0,9,101 0/0:6:18:0,18,212
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|
20 10036484 rs56234782 T . 647.36 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;OMNI;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*176T>A;refseq.codingCoordStr_2=c.*176T>A;refseq.codingCoordStr_3=c.*176T>C;refseq.codingCoordStr_4=c.*176T>C;refseq.codingCoordStr_5=c.*176T>G;refseq.codingCoordStr_6=c.*176T>G;refseq.codingCoordStr_7=c.*176T>T;refseq.codingCoordStr_8=c.*176T>T;refseq.end_1=10036484;refseq.end_2=10036484;refseq.end_3=10036484;refseq.end_4=10036484;refseq.end_5=10036484;refseq.end_6=10036484;refseq.end_7=10036484;refseq.end_8=10036484;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=2900;refseq.mrnaCoord_2=2836;refseq.mrnaCoord_3=2900;refseq.mrnaCoord_4=2836;refseq.mrnaCoord_5=2900;refseq.mrnaCoord_6=2836;refseq.mrnaCoord_7=2900;refseq.mrnaCoord_8=2836;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=335;refseq.spliceDist_2=335;refseq.spliceDist_3=335;refseq.spliceDist_4=335;refseq.spliceDist_5=335;refseq.spliceDist_6=335;refseq.spliceDist_7=335;refseq.spliceDist_8=335;refseq.start_1=10036484;refseq.start_2=10036484;refseq.start_3=10036484;refseq.start_4=10036484;refseq.start_5=10036484;refseq.start_6=10036484;refseq.start_7=10036484;refseq.start_8=10036484;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:6:18:0,18,218 0/0:4:12:0,12,135 0/0:2:6:0,6,73
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|
20 10036740 rs77141691 A G 62.90 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.codingCoordStr_1=c.*432A>G;refseq.codingCoordStr_2=c.*432A>G;refseq.end_1=10036740;refseq.end_2=10036740;refseq.haplotypeAlternate_1=G;refseq.haplotypeAlternate_2=G;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.mrnaCoord_1=3156;refseq.mrnaCoord_2=3092;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.spliceDist_1=591;refseq.spliceDist_2=591;refseq.start_1=10036740;refseq.start_2=10036740;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:5:15:0,15,165 0/1:3:25:46,0,25
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|
20 10036813 . G . 46.73 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*505G>A;refseq.codingCoordStr_2=c.*505G>A;refseq.codingCoordStr_3=c.*505G>C;refseq.codingCoordStr_4=c.*505G>C;refseq.codingCoordStr_5=c.*505G>G;refseq.codingCoordStr_6=c.*505G>G;refseq.codingCoordStr_7=c.*505G>T;refseq.codingCoordStr_8=c.*505G>T;refseq.end_1=10036813;refseq.end_2=10036813;refseq.end_3=10036813;refseq.end_4=10036813;refseq.end_5=10036813;refseq.end_6=10036813;refseq.end_7=10036813;refseq.end_8=10036813;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3229;refseq.mrnaCoord_2=3165;refseq.mrnaCoord_3=3229;refseq.mrnaCoord_4=3165;refseq.mrnaCoord_5=3229;refseq.mrnaCoord_6=3165;refseq.mrnaCoord_7=3229;refseq.mrnaCoord_8=3165;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-595;refseq.spliceDist_2=-595;refseq.spliceDist_3=-595;refseq.spliceDist_4=-595;refseq.spliceDist_5=-595;refseq.spliceDist_6=-595;refseq.spliceDist_7=-595;refseq.spliceDist_8=-595;refseq.start_1=10036813;refseq.start_2=10036813;refseq.start_3=10036813;refseq.start_4=10036813;refseq.start_5=10036813;refseq.start_6=10036813;refseq.start_7=10036813;refseq.start_8=10036813;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,163 0/0:2:6:0,6,64
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|
20 10036870 . C . 549.20 PASS AC=0;AF=0.00;AN=6;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*562C>A;refseq.codingCoordStr_2=c.*562C>A;refseq.codingCoordStr_3=c.*562C>C;refseq.codingCoordStr_4=c.*562C>C;refseq.codingCoordStr_5=c.*562C>G;refseq.codingCoordStr_6=c.*562C>G;refseq.codingCoordStr_7=c.*562C>T;refseq.codingCoordStr_8=c.*562C>T;refseq.end_1=10036870;refseq.end_2=10036870;refseq.end_3=10036870;refseq.end_4=10036870;refseq.end_5=10036870;refseq.end_6=10036870;refseq.end_7=10036870;refseq.end_8=10036870;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3286;refseq.mrnaCoord_2=3222;refseq.mrnaCoord_3=3286;refseq.mrnaCoord_4=3222;refseq.mrnaCoord_5=3286;refseq.mrnaCoord_6=3222;refseq.mrnaCoord_7=3286;refseq.mrnaCoord_8=3222;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-538;refseq.spliceDist_2=-538;refseq.spliceDist_3=-538;refseq.spliceDist_4=-538;refseq.spliceDist_5=-538;refseq.spliceDist_6=-538;refseq.spliceDist_7=-538;refseq.spliceDist_8=-538;refseq.start_1=10036870;refseq.start_2=10036870;refseq.start_3=10036870;refseq.start_4=10036870;refseq.start_5=10036870;refseq.start_6=10036870;refseq.start_7=10036870;refseq.start_8=10036870;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:4:12:0,12,139 0/0:1:3:0,3,36
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20 10036989 rs76697171 G . 273.53 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*681G>A;refseq.codingCoordStr_2=c.*681G>A;refseq.codingCoordStr_3=c.*681G>C;refseq.codingCoordStr_4=c.*681G>C;refseq.codingCoordStr_5=c.*681G>G;refseq.codingCoordStr_6=c.*681G>G;refseq.codingCoordStr_7=c.*681G>T;refseq.codingCoordStr_8=c.*681G>T;refseq.end_1=10036989;refseq.end_2=10036989;refseq.end_3=10036989;refseq.end_4=10036989;refseq.end_5=10036989;refseq.end_6=10036989;refseq.end_7=10036989;refseq.end_8=10036989;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3405;refseq.mrnaCoord_2=3341;refseq.mrnaCoord_3=3405;refseq.mrnaCoord_4=3341;refseq.mrnaCoord_5=3405;refseq.mrnaCoord_6=3341;refseq.mrnaCoord_7=3405;refseq.mrnaCoord_8=3341;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-419;refseq.spliceDist_2=-419;refseq.spliceDist_3=-419;refseq.spliceDist_4=-419;refseq.spliceDist_5=-419;refseq.spliceDist_6=-419;refseq.spliceDist_7=-419;refseq.spliceDist_8=-419;refseq.start_1=10036989;refseq.start_2=10036989;refseq.start_3=10036989;refseq.start_4=10036989;refseq.start_5=10036989;refseq.start_6=10036989;refseq.start_7=10036989;refseq.start_8=10036989;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:5:15:0,15,165 0/0:5:15:0,15,159 0/0:1:3:0,3,30
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20 10037037 rs2327261 C T 26053.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.codingCoordStr_1=c.*729C>T;refseq.codingCoordStr_2=c.*729C>T;refseq.end_1=10037037;refseq.end_2=10037037;refseq.haplotypeAlternate_1=T;refseq.haplotypeAlternate_2=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.mrnaCoord_1=3453;refseq.mrnaCoord_2=3389;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.numMatchingRecords=2;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.spliceDist_1=-371;refseq.spliceDist_2=-371;refseq.start_1=10037037;refseq.start_2=10037037;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+ GT:DP:GQ:PL 1/1:3:9:106,9,0 0/1:5:51:51,0,86 0/0:2:6:0,6,69
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20 10037098 . C . 63.84 PASS AC=0;AF=0.00;AN=6;DP=11;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*790C>A;refseq.codingCoordStr_2=c.*790C>A;refseq.codingCoordStr_3=c.*790C>C;refseq.codingCoordStr_4=c.*790C>C;refseq.codingCoordStr_5=c.*790C>G;refseq.codingCoordStr_6=c.*790C>G;refseq.codingCoordStr_7=c.*790C>T;refseq.codingCoordStr_8=c.*790C>T;refseq.end_1=10037098;refseq.end_2=10037098;refseq.end_3=10037098;refseq.end_4=10037098;refseq.end_5=10037098;refseq.end_6=10037098;refseq.end_7=10037098;refseq.end_8=10037098;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=C;refseq.haplotypeReference_2=C;refseq.haplotypeReference_3=C;refseq.haplotypeReference_4=C;refseq.haplotypeReference_5=C;refseq.haplotypeReference_6=C;refseq.haplotypeReference_7=C;refseq.haplotypeReference_8=C;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3514;refseq.mrnaCoord_2=3450;refseq.mrnaCoord_3=3514;refseq.mrnaCoord_4=3450;refseq.mrnaCoord_5=3514;refseq.mrnaCoord_6=3450;refseq.mrnaCoord_7=3514;refseq.mrnaCoord_8=3450;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-310;refseq.spliceDist_2=-310;refseq.spliceDist_3=-310;refseq.spliceDist_4=-310;refseq.spliceDist_5=-310;refseq.spliceDist_6=-310;refseq.spliceDist_7=-310;refseq.spliceDist_8=-310;refseq.start_1=10037098;refseq.start_2=10037098;refseq.start_3=10037098;refseq.start_4=10037098;refseq.start_5=10037098;refseq.start_6=10037098;refseq.start_7=10037098;refseq.start_8=10037098;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:4:12:0,12,127 0/0:4:12:0,12,135
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20 10037104 . T . 251.42 PASS AC=0;AF=0.00;AN=6;DP=10;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*796T>A;refseq.codingCoordStr_2=c.*796T>A;refseq.codingCoordStr_3=c.*796T>C;refseq.codingCoordStr_4=c.*796T>C;refseq.codingCoordStr_5=c.*796T>G;refseq.codingCoordStr_6=c.*796T>G;refseq.codingCoordStr_7=c.*796T>T;refseq.codingCoordStr_8=c.*796T>T;refseq.end_1=10037104;refseq.end_2=10037104;refseq.end_3=10037104;refseq.end_4=10037104;refseq.end_5=10037104;refseq.end_6=10037104;refseq.end_7=10037104;refseq.end_8=10037104;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=T;refseq.haplotypeReference_2=T;refseq.haplotypeReference_3=T;refseq.haplotypeReference_4=T;refseq.haplotypeReference_5=T;refseq.haplotypeReference_6=T;refseq.haplotypeReference_7=T;refseq.haplotypeReference_8=T;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3520;refseq.mrnaCoord_2=3456;refseq.mrnaCoord_3=3520;refseq.mrnaCoord_4=3456;refseq.mrnaCoord_5=3520;refseq.mrnaCoord_6=3456;refseq.mrnaCoord_7=3520;refseq.mrnaCoord_8=3456;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-304;refseq.spliceDist_2=-304;refseq.spliceDist_3=-304;refseq.spliceDist_4=-304;refseq.spliceDist_5=-304;refseq.spliceDist_6=-304;refseq.spliceDist_7=-304;refseq.spliceDist_8=-304;refseq.start_1=10037104;refseq.start_2=10037104;refseq.start_3=10037104;refseq.start_4=10037104;refseq.start_5=10037104;refseq.start_6=10037104;refseq.start_7=10037104;refseq.start_8=10037104;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:4:12:0,12,143 0/0:4:12:0,12,143
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|
20 10037119 . G . 469.85 PASS AC=0;AF=0.00;AN=4;DBSNP129;DP=3;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*811G>A;refseq.codingCoordStr_2=c.*811G>A;refseq.codingCoordStr_3=c.*811G>C;refseq.codingCoordStr_4=c.*811G>C;refseq.codingCoordStr_5=c.*811G>G;refseq.codingCoordStr_6=c.*811G>G;refseq.codingCoordStr_7=c.*811G>T;refseq.codingCoordStr_8=c.*811G>T;refseq.end_1=10037119;refseq.end_2=10037119;refseq.end_3=10037119;refseq.end_4=10037119;refseq.end_5=10037119;refseq.end_6=10037119;refseq.end_7=10037119;refseq.end_8=10037119;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3535;refseq.mrnaCoord_2=3471;refseq.mrnaCoord_3=3535;refseq.mrnaCoord_4=3471;refseq.mrnaCoord_5=3535;refseq.mrnaCoord_6=3471;refseq.mrnaCoord_7=3535;refseq.mrnaCoord_8=3471;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-289;refseq.spliceDist_2=-289;refseq.spliceDist_3=-289;refseq.spliceDist_4=-289;refseq.spliceDist_5=-289;refseq.spliceDist_6=-289;refseq.spliceDist_7=-289;refseq.spliceDist_8=-289;refseq.start_1=10037119;refseq.start_2=10037119;refseq.start_3=10037119;refseq.start_4=10037119;refseq.start_5=10037119;refseq.start_6=10037119;refseq.start_7=10037119;refseq.start_8=10037119;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL ./. 0/0:2:6:0,6,65 0/0:1:3:0,3,37
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20 10037174 . A . 131.91 PASS AC=0;AF=0.00;AN=6;DP=8;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*866A>A;refseq.codingCoordStr_2=c.*866A>A;refseq.codingCoordStr_3=c.*866A>C;refseq.codingCoordStr_4=c.*866A>C;refseq.codingCoordStr_5=c.*866A>G;refseq.codingCoordStr_6=c.*866A>G;refseq.codingCoordStr_7=c.*866A>T;refseq.codingCoordStr_8=c.*866A>T;refseq.end_1=10037174;refseq.end_2=10037174;refseq.end_3=10037174;refseq.end_4=10037174;refseq.end_5=10037174;refseq.end_6=10037174;refseq.end_7=10037174;refseq.end_8=10037174;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=A;refseq.haplotypeReference_2=A;refseq.haplotypeReference_3=A;refseq.haplotypeReference_4=A;refseq.haplotypeReference_5=A;refseq.haplotypeReference_6=A;refseq.haplotypeReference_7=A;refseq.haplotypeReference_8=A;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3590;refseq.mrnaCoord_2=3526;refseq.mrnaCoord_3=3590;refseq.mrnaCoord_4=3526;refseq.mrnaCoord_5=3590;refseq.mrnaCoord_6=3526;refseq.mrnaCoord_7=3590;refseq.mrnaCoord_8=3526;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-234;refseq.spliceDist_2=-234;refseq.spliceDist_3=-234;refseq.spliceDist_4=-234;refseq.spliceDist_5=-234;refseq.spliceDist_6=-234;refseq.spliceDist_7=-234;refseq.spliceDist_8=-234;refseq.start_1=10037174;refseq.start_2=10037174;refseq.start_3=10037174;refseq.start_4=10037174;refseq.start_5=10037174;refseq.start_6=10037174;refseq.start_7=10037174;refseq.start_8=10037174;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:4:12:0,12,143 0/0:3:9:0,9,103 0/0:1:3:0,3,39
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20 10037206 rs8114203 G . 7502.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;refseq.chr_1=20;refseq.chr_2=20;refseq.chr_3=20;refseq.chr_4=20;refseq.chr_5=20;refseq.chr_6=20;refseq.chr_7=20;refseq.chr_8=20;refseq.codingCoordStr_1=c.*898G>A;refseq.codingCoordStr_2=c.*898G>A;refseq.codingCoordStr_3=c.*898G>C;refseq.codingCoordStr_4=c.*898G>C;refseq.codingCoordStr_5=c.*898G>G;refseq.codingCoordStr_6=c.*898G>G;refseq.codingCoordStr_7=c.*898G>T;refseq.codingCoordStr_8=c.*898G>T;refseq.end_1=10037206;refseq.end_2=10037206;refseq.end_3=10037206;refseq.end_4=10037206;refseq.end_5=10037206;refseq.end_6=10037206;refseq.end_7=10037206;refseq.end_8=10037206;refseq.haplotypeAlternate_1=A;refseq.haplotypeAlternate_2=A;refseq.haplotypeAlternate_3=C;refseq.haplotypeAlternate_4=C;refseq.haplotypeAlternate_5=G;refseq.haplotypeAlternate_6=G;refseq.haplotypeAlternate_7=T;refseq.haplotypeAlternate_8=T;refseq.haplotypeReference_1=G;refseq.haplotypeReference_2=G;refseq.haplotypeReference_3=G;refseq.haplotypeReference_4=G;refseq.haplotypeReference_5=G;refseq.haplotypeReference_6=G;refseq.haplotypeReference_7=G;refseq.haplotypeReference_8=G;refseq.inCodingRegion_1=false;refseq.inCodingRegion_2=false;refseq.inCodingRegion_3=false;refseq.inCodingRegion_4=false;refseq.inCodingRegion_5=false;refseq.inCodingRegion_6=false;refseq.inCodingRegion_7=false;refseq.inCodingRegion_8=false;refseq.mrnaCoord_1=3622;refseq.mrnaCoord_2=3558;refseq.mrnaCoord_3=3622;refseq.mrnaCoord_4=3558;refseq.mrnaCoord_5=3622;refseq.mrnaCoord_6=3558;refseq.mrnaCoord_7=3622;refseq.mrnaCoord_8=3558;refseq.name2_1=ANKRD5;refseq.name2_2=ANKRD5;refseq.name2_3=ANKRD5;refseq.name2_4=ANKRD5;refseq.name2_5=ANKRD5;refseq.name2_6=ANKRD5;refseq.name2_7=ANKRD5;refseq.name2_8=ANKRD5;refseq.name_1=NM_022096;refseq.name_2=NM_198798;refseq.name_3=NM_022096;refseq.name_4=NM_198798;refseq.name_5=NM_022096;refseq.name_6=NM_198798;refseq.name_7=NM_022096;refseq.name_8=NM_198798;refseq.numMatchingRecords=8;refseq.positionType_1=utr3;refseq.positionType_2=utr3;refseq.positionType_3=utr3;refseq.positionType_4=utr3;refseq.positionType_5=utr3;refseq.positionType_6=utr3;refseq.positionType_7=utr3;refseq.positionType_8=utr3;refseq.spliceDist_1=-202;refseq.spliceDist_2=-202;refseq.spliceDist_3=-202;refseq.spliceDist_4=-202;refseq.spliceDist_5=-202;refseq.spliceDist_6=-202;refseq.spliceDist_7=-202;refseq.spliceDist_8=-202;refseq.start_1=10037206;refseq.start_2=10037206;refseq.start_3=10037206;refseq.start_4=10037206;refseq.start_5=10037206;refseq.start_6=10037206;refseq.start_7=10037206;refseq.start_8=10037206;refseq.transcriptStrand_1=+;refseq.transcriptStrand_2=+;refseq.transcriptStrand_3=+;refseq.transcriptStrand_4=+;refseq.transcriptStrand_5=+;refseq.transcriptStrand_6=+;refseq.transcriptStrand_7=+;refseq.transcriptStrand_8=+ GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:5:15:0,15,171 0/0:3:9:0,9,107
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20 10037536 . A . 231.01 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,175 0/0:2:6:0,6,73 0/0:2:6:0,6,74
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20 10037682 rs34732215 C . 474.48 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:2:6:0,6,70 0/0:1:3:0,3,36
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20 10037709 rs518364 A . 19868.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8;HAPMAP GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:4:12:0,12,126 0/0:1:3:0,3,36
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20 10038247 rs58593772 T . 5568.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:8:24:0,24,267 0/0:3:9:0,9,109
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20 10038441 . T . 256.59 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:10:30:0,30,356 0/0:3:9:0,9,107 0/0:3:9:0,9,111
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20 10038448 rs75473362 A . 1202.34 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14;OMNI GT:DP:GQ:PL 0/0:9:27:0,27,324 0/0:3:9:0,9,108 0/0:2:6:0,6,76
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20 10038460 . G . 118.96 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:9:27:0,27,306 0/0:2:6:0,6,73 0/0:3:9:0,9,94
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20 10038588 . C . 274.92 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:4:12:0,12,139 ./.
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20 10038640 rs471085 A . 22519.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:6:18:0,18,209 0/0:3:9:0,9,110 0/0:3:9:0,9,111
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20 10038994 rs666519 C . 30355.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=12;HAPMAP;OMNI GT:DP:GQ:PL 0/0:8:24:0,24,270 0/0:4:12:0,12,136 ./.
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20 10039134 . C . 384.32 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,97 0/0:4:12:0,12,142 0/0:5:15:0,15,167
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20 10039371 rs678696 T . 19088.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:6:18:0,18,216 0/0:5:12:0,12,153 0/0:7:21:0,21,249
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20 10039451 rs6087124 A G 21153.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/1:5:21:104,0,21 0/0:7:21:0,21,236 1/1:1:3:33,3,0
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20 10039533 . C . 47.27 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,64 0/0:4:12:0,12,135 0/0:2:6:0,6,70
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20 10039857 . C . 128.22 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,234 0/0:3:9:0,9,99 0/0:4:12:0,12,143
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20 10040025 . G . 113.75 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,130 0/0:6:18:0,18,198 0/0:2:6:0,6,69
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20 10040117 rs8123100 C . 4711.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=8;HAPMAP GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:6:18:0,18,197 ./.
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20 10040124 . G . 226.80 PASS AC=0;AF=0.00;AN=4;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,167 ./.
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20 10040339 . G . 122.22 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,241 0/0:6:18:0,18,200 0/0:1:3:0,3,22
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20 10040355 rs75683026 G . 864.61 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,206 0/0:8:24:0,24,266 0/0:1:3:0,3,31
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20 10040563 rs77028439 C . 760.07 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=10 GT:DP:GQ:PL ./. 0/0:6:18:0,18,199 0/0:4:12:0,12,128
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20 10040586 . A . 56.74 PASS AC=0;AF=0.00;AN=4;DP=11 GT:DP:GQ:PL ./. 0/0:7:21:0,21,263 0/0:4:12:0,12,148
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20 10040620 . A . 76.66 PASS AC=0;AF=0.00;AN=4;DP=11 GT:DP:GQ:PL ./. 0/0:6:18:0,18,217 0/0:5:15:0,15,173
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20 10040671 rs79384903 A . 21.44 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:5:15:0,15,182 0/0:3:9:0,9,115
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|
20 10040877 . T . 5.58 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,215 0/0:5:15:0,15,178 0/0:5:15:0,15,186
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20 10040934 . C . 198.67 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,119 0/0:3:9:0,9,98 0/0:2:6:0,6,63
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20 10041021 rs78529668 C . 1105.01 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=6 GT:DP:GQ:PL ./. 0/0:3:9:0,9,100 0/0:3:9:0,9,94
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20 10041098 rs117752238 C . 69.05 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,92 0/0:5:15:0,15,156 0/0:1:3:0,3,32
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20 10041123 . G . 146.69 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:5:15:0,15,163 0/0:1:3:0,3,32
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20 10041168 . C . 14.42 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,54 0/0:2:6:0,6,71 0/0:4:12:0,12,126
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20 10041208 . A . 249.56 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:8:24:0,24,276 0/0:1:3:0,3,39 0/0:2:6:0,6,72
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20 10041304 rs559129 C T 85474.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=20;HAPMAP;OMNI GT:DP:GQ:PL 0/0:9:27:0,27,278 0/1:9:44:44,0,176 1/1:2:6:74,6,0
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20 10041465 . C . 33.74 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:4:12:0,12,127 0/0:2:6:0,6,67
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20 10041506 . T . 134.34 PASS AC=0;AF=0.00;AN=6;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:2:6:0,6,68 0/0:1:3:0,3,36
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20 10041550 rs117504921 A . 651.25 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:4:12:0,12,127 0/0:2:6:0,6,72
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20 10041682 rs116802648 A . 260.52 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:6:18:0,18,202 0/0:1:3:0,3,34 0/0:1:3:0,3,30
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20 10041685 . G . 34.09 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL 0/0:5:15:0,15,146 0/0:1:3:0,3,26 ./.
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20 10041703 rs74270282 G . 2997.84 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:2:6:0,6,62 0/0:2:6:0,6,68 ./.
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20 10041741 . G . 51.37 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:6:18:0,18,190 0/0:2:6:0,6,58 0/0:1:3:0,3,35
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20 10041757 rs6133786 T A 25083.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/1:1:1.76:35,3,0 0/0:3:9:0,9,110 1/1:1:3:24,3,0
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20 10041831 . A . 52.80 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,110 0/0:1:3:0,3,33 0/0:3:9:0,9,112
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20 10042169 . G . 127.95 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:6:18:0,18,208 0/0:2:6:0,6,67
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20 10042319 rs631317 C T 113158.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15;OMNI GT:DP:GQ:PL 1/1:2:6:71,6,0 0/1:10:63:63,0,195 1/1:3:9:107,9,0
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20 10042400 . T . 135.21 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:3:9:0,9,104 0/0:1:3:0,3,33
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20 10042571 rs77839712 T . 709.14 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:4:12:0,12,121 0/0:2:6:0,6,70
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20 10042652 . A . 28.50 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:3:9:0,9,96 0/0:4:12:0,12,150
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20 10042691 . T . 24.01 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,247 0/0:2:6:0,6,71 0/0:3:9:0,9,116
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20 10042761 rs633445 A . 34193.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,253 0/0:2:6:0,6,74 0/0:4:12:0,12,142
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20 10042829 rs633841 A G 115836.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP GT:DP:GQ:PL 1/1:6:18:207,18,0 0/1:3:26:57,0,26 1/1:4:12:135,12,0
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20 10042844 . A . 194.63 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,250 0/0:3:9:0,9,102 0/0:4:12:0,12,151
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20 10042908 rs78110693 A T 497.29 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,143 0/1:5:10:126,0,10 0/0:2:6:0,6,73
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20 10043002 rs73071529 A . 432.95 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:3:9:0,9,107 0/0:2:6:0,6,77
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20 10043035 rs115651906 G . 163.09 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,98 0/0:5:15:0,15,172 0/0:3:9:0,9,110
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20 10043047 rs78541090 G . 26.76 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:5:15:0,15,167 0/0:3:9:0,9,106
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20 10043306 . G . 31.46 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:6:0.04:20,0,146 0/0:2:6:0,6,73
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20 10043429 . G . 11.69 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:4:9:0,9,113 0/0:2:6:0,6,75
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20 10043458 . C . 238.80 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:2:6:0,6,70 0/0:3:9:0,9,107
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20 10043658 rs78900400 G . 999.64 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=21 GT:DP:GQ:PL 0/0:10:30:0,30,339 0/0:4:12:0,12,128 0/0:7:21:0,21,245
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20 10043672 . T . 31.95 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:8:24:0,24,286 0/0:4:12:0,12,140 0/0:7:21:0,21,249
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20 10043976 . C . 89.57 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:3:9:0,9,111 0/0:5:15:0,15,184
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20 10043986 rs6039665 A . 9289.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,104 0/0:3:9:0,9,106 0/0:4:12:0,12,146
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20 10044034 . T . 228.56 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:8:24:0,24,270 0/0:5:15:0,15,179 0/0:3:9:0,9,107
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20 10044178 . G . 22.68 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,211 0/0:3:9:0,9,105 0/0:2:6:0,6,73
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20 10044195 . G . 128.03 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,164 0/0:5:15:0,15,177 0/0:2:6:0,6,67
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20 10044235 rs114735136 C . 927.28 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,85 0/0:5:15:0,15,167 0/0:4:12:0,12,129
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20 10044282 rs6133787 T . 16166.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=2;OMNI GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:1:3:0,3,32 ./.
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20 10044472 rs79828233 C . 7412.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:6:15:0,15,156 0/0:2:6:0,6,70
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20 10044631 . G . 17.94 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:3:9:0,9,88 0/0:7:21:0,21,211 0/0:4:0.09:17,0,83
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20 10044650 rs6516548 A . 11392.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=19 GT:DP:GQ:PL 0/0:8:24:0,24,282 0/0:7:21:0,21,256 0/0:4:12:0,12,146
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20 10044683 rs79361716 G . 8235.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,240 0/0:4:12:0,12,141 0/0:4:12:0,12,136
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20 10044722 rs79237645 A . 710.29 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,110 0/0:3:9:0,9,114 0/0:2:6:0,6,73
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20 10044803 . G . 42.82 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:3:9:0,9,96 0/0:2:6:0,6,68
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20 10044849 rs663380 A G 19187.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=9;HAPMAP;OMNI GT:DP:GQ:PL 0/0:6:18:0,18,204 1/1:2:6:71,6,0 0/0:1:3:0,3,38
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20 10044885 . A . 22.02 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:2:6:0,6,67 0/0:4:12:0,12,135
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20 10044886 rs117864759 C . 648.10 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,107 0/0:1:3:0,3,35 0/0:4:12:0,12,118
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20 10044893 . C . 14.93 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,90 0/0:2:6:0,6,73 0/0:4:12:0,12,119
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20 10045026 rs17514840 C . 7493.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,129 0/0:5:15:0,15,161 0/0:2:6:0,6,61
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20 10045062 . C . 15.83 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:6:18:0,18,190 0/0:2:6:0,6,72
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20 10045078 rs674630 G T 64517.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:7:21:0,21,234 0/1:4:21:96,0,21 1/1:2:6:76,6,0
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20 10045337 . G . 78.67 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,227 0/0:5:15:0,15,175 0/0:1:3:0,3,34
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20 10045609 rs6057122 A . 6958.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:6:18:0,18,211 0/0:1:3:0,3,38
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20 10045642 rs572752 G C 39135.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=19 GT:DP:GQ:PL 0/0:7:21:0,21,244 0/1:10:99:162,0,99 0/0:2:6:0,6,51
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20 10045667 . G . 10.13 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:8:24:0,24,268 0/0:5:15:0,15,168 0/0:3:9:0,9,100
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20 10045703 . C . 502.04 PASS AC=0;AF=0.00;AN=6;DP=20 GT:DP:GQ:PL 0/0:11:33:0,33,370 0/0:5:15:0,15,169 0/0:4:12:0,12,134
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20 10045898 . C . 345.55 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,125 0/0:2:6:0,6,67 0/0:2:6:0,6,55
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20 10045986 . C . 713.52 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:7:21:0,21,241 0/0:1:3:0,3,35
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20 10046056 . A . 84.93 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:10:30:0,30,333 0/0:4:12:0,12,146 0/0:1:3:0,3,33
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20 10046099 rs80077941 A . 1513 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17;OMNI GT:DP:GQ:PL 0/0:8:24:0,24,288 0/0:7:18:0,18,217 0/0:2:6:0,6,76
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20 10046259 . A . 111.47 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:2:6:0,6,67 0/0:1:3:0,3,36
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20 10046316 rs118037465 A . 1853.53 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,176 0/0:4:12:0,12,131 ./.
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20 10046489 rs73071542 C . 4924.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:4:12:0,12,147 0/0:1:3:0,3,38
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20 10046537 rs583827 A G 73737.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=10;HAPMAP;OMNI GT:DP:GQ:PL 1/1:5:15:143,15,0 1/1:4:12:135,12,0 0/0:1:3:0,3,34
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20 10046561 . C . 4.77 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:4:12:0,12,133 0/0:1:3:0,3,38
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20 10046583 . G . 59.95 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,156 0/0:4:12:0,12,130 0/0:1:3:0,3,36
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20 10046611 . C . 73.87 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:4:12:0,12,145 0/0:1:3:0,3,36
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20 10046647 . A . 80.40 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:4:12:0,12,139 0/0:1:3:0,3,36
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20 10046652 . C . 128.98 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,91 0/0:4:12:0,12,128 0/0:1:3:0,3,28
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20 10046671 . T . 358.34 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:3:9:0,9,111 0/0:2:6:0,6,74
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20 10046720 . A . 131.42 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,108 0/0:2:6:0,6,75
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20 10046801 . G . 142.97 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:8:24:0,24,264 0/0:5:15:0,15,175 0/0:1:3:0,3,37
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20 10046828 rs6087125 T C 26474.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP;OMNI GT:DP:GQ:PL 1/1:6:18:199,18,0 0/0:4:12:0,12,148 0/0:1:3:0,3,35
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20 10046978 rs17417253 A . 7249.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:6:18:0,18,199 0/0:1:3:0,3,38
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20 10047038 rs496315 T C 63937.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=10;HAPMAP;OMNI GT:DP:GQ:PL 0/1:4:58:58,0,58 0/1:3:30:51,0,30 1/1:3:9:102,9,0
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20 10047180 . G . 120.99 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,243 0/0:3:9:0,9,91 0/0:5:15:0,15,180
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20 10047314 . T . 4.03 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:2:6:0,6,69 0/0:3:9:0,9,113
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20 10047369 . C . 35.79 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,93 0/0:5:15:0,15,161 0/0:5:15:0,15,155
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20 10047435 rs598275 G A 82495.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=8;HAPMAP;OMNI GT:DP:GQ:PL 1/1:2:6:69,6,0 1/1:2:6:69,6,0 1/1:4:12:139,12,0
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20 10047519 . C . 103.17 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:11:33:0,33,368 0/0:4:12:0,12,137 0/0:3:9:0,9,104
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20 10047554 . G . 41.83 PASS AC=0;AF=0.00;AN=6;DP=22 GT:DP:GQ:PL 0/0:10:30:0,30,328 0/0:7:21:0,21,237 0/0:5:15:0,15,165
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20 10047659 . C . 338.32 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,200 0/0:6:18:0,18,199 0/0:4:12:0,12,126
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20 10047662 . A . 49.50 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,209 0/0:6:18:0,18,208 0/0:4:12:0,12,149
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20 10047684 rs6039666 C . 625.48 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:8:24:0,24,280 0/0:5:15:0,15,185
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20 10047687 . G . 210.34 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:7:21:0,21,240 0/0:6:18:0,18,206
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20 10047713 rs6057123 G . 1133.11 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=20 GT:DP:GQ:PL 0/0:8:24:0,24,278 0/0:6:18:0,18,204 0/0:6:18:0,18,205
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20 10047760 . A . 220.29 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:9:27:0,27,305 0/0:8:24:0,24,266 0/0:2:6:0,6,72
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20 10047826 . C . 31.65 PASS AC=0;AF=0.00;AN=2;DP=5 GT:DP:GQ:PL ./. 0/0:5:15:0,15,177 ./.
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20 10047885 . G . 17.19 PASS AC=0;AF=0.00;AN=4;DP=12 GT:DP:GQ:PL 0/0:8:24:0,24,263 0/0:4:12:0,12,139 ./.
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20 10047936 rs114162323 G . 2315.61 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:3:9:0,9,104 0/0:1:3:0,3,35
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20 10047964 rs6141111 A T 54074.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/1:6:80:89,0,80 0/0:6:18:0,18,208 0/0:2:6:0,6,74
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20 10048036 . T . 177.51 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:4:12:0,12,136 0/0:6:18:0,18,217
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20 10048148 . G . 245.29 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:7:21:0,21,237 0/0:1:3:0,3,32 0/0:2:6:0,6,72
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20 10048228 rs112091503 C . 583.22 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:4:12:0,12,137 0/0:1:3:0,3,34
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20 10048314 . T . 18.80 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,247 0/0:4:12:0,12,127 0/0:5:15:0,15,187
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20 10048323 rs79005338 T A 4640.04 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/1:6:54:54,0,129 0/0:3:9:0,9,103 0/0:5:15:0,15,191
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20 10048393 rs612588 C G 92524.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 1/1:8:24:267,24,0 0/1:4:21:21,0,74 0/0:4:12:0,12,110
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20 10048400 rs112269559 C . 623.96 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,204 0/0:5:15:0,15,148 0/0:3:9:0,9,90
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20 10048503 . G . 856.11 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:4:12:0,12,126 0/0:4:12:0,12,129
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20 10048508 rs36082844 C G 16864.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,97 0/1:4:10:10,0,87 0/0:4:12:0,12,138
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20 10048514 rs6039667 T . 1461.74 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:4:12:0,12,143 0/0:4:12:0,12,148
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20 10048519 . C . 111.98 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:6:18:0,18,192 0/0:3:9:0,9,99
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20 10048605 . C . 973.96 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:6:18:0,18,183 0/0:3:9:0,9,85
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20 10048606 rs6039668 G . 19013.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,140 0/0:5:15:0,15,151 0/0:3:9:0,9,83
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20 10048611 rs6057124 C . 802.08 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,139 0/0:5:15:0,15,167 0/0:3:9:0,9,102
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20 10048666 rs74270283 A . 215.64 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:6:18:0,18,213 0/0:4:12:0,12,154
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20 10048709 . C . 339.81 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,204 0/0:6:18:0,18,207 0/0:2:6:0,6,69
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20 10048795 . T . 45.79 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,143 0/0:6:18:0,18,220 0/0:1:3:0,3,37
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20 10048814 . T . 4.68 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:6:18:0,18,222 0/0:2:6:0,6,76
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20 10048946 . C . 47.86 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:4:12:0,12,146 0/0:5:15:0,15,157
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20 10049058 . C . 307.73 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,207 0/0:8:24:0,24,277 0/0:1:3:0,3,37
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20 10049063 rs75562346 T . 1412.51 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,176 0/0:8:24:0,24,264 0/0:1:3:0,3,36
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20 10049120 rs6039669 A . 1040.85 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,145 0/0:8:24:0,24,283 ./.
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20 10049385 rs61459736 A . 131.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,181 0/0:4:12:0,12,136 0/0:3:9:0,9,114
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20 10049410 . C . 39.65 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:6:18:0,18,209 0/0:3:9:0,9,107
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20 10049444 rs116951334 G . 54.69 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,206 0/0:5:15:0,15,173 0/0:2:6:0,6,72
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20 10049645 . G . 844.38 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:3:9:0,9,95 0/0:1:3:0,3,33
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20 10049714 rs113586697 G . 1424.16 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,26 0/0:2:6:0,6,49 0/0:3:9:0,9,88
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20 10049748 rs80235536 T . 173.51 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:4:12:0,12,128 0/0:3:9:0,9,110
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20 10049766 . T . 3.53 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:5:15:0,15,164 0/0:4:12:0,12,144
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20 10049768 rs1989104 A . 37007.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:1:3:0,3,30 0/0:5:15:0,15,165 0/0:4:12:0,12,141
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20 10049828 rs6057126 C . 9818.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,85 0/0:6:18:0,18,200 0/0:2:6:0,6,58
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20 10049937 . G . 464.20 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:4:12:0,12,129 0/0:4:12:0,12,144
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20 10050008 . T . 310.22 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:1:3:0,3,33 0/0:4:12:0,12,140
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20 10050129 . G . 5.23 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,88 0/0:8:24:0,24,206 0/0:2:6:0,6,58
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20 10050278 rs74445327 C . 696.30 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:5:15:0,15,147 0/0:2:6:0,6,51
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20 10050298 rs73897528 A . 267.07 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:9:27:0,27,309 0/0:1:3:0,3,37
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20 10050310 . G . 482.03 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:8:24:0,24,237 0/0:1:3:0,3,36
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20 10050400 . T . 53.64 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,111 0/0:2:6:0,6,76 0/0:4:12:0,12,142
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20 10050540 . T . 523.14 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,209 0/0:4:12:0,12,146 0/0:4:12:0,12,132
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20 10050667 rs659930 C T 54943.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=22;HAPMAP GT:DP:GQ:PL 1/1:7:21:250,21,0 0/1:11:36:279,0,36 0/0:4:12:0,12,144
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20 10050699 . T . 57.51 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:7:21:0,21,252 0/0:8:24:0,24,286 0/0:4:12:0,12,135
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20 10050828 rs660454 T C 56195.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP;OMNI GT:DP:GQ:PL 1/1:5:15:169,15,0 0/1:4:49:64,0,49 0/0:2:6:0,6,72
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20 10051156 rs112955930 A . 154.41 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:5:15:0,15,168 0/0:2:6:0,6,70
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20 10051248 . C . 66.79 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,97 0/0:2:6:0,6,72 0/0:2:6:0,6,65
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20 10051323 . G . 40.21 PASS AC=0;AF=0.00;AN=6;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,28 0/0:1:3:0,3,25 0/0:3:9:0,9,90
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20 10051342 rs78351688 G . 6135.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:6:18:0,18,199 0/0:2:6:0,6,69 0/0:2:6:0,6,71
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20 10051376 rs112917171 A . 7503.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:6:18:0,18,211 0/0:8:24:0,24,260 0/0:3:9:0,9,104
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20 10051448 rs565455 T C 43131.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:3:9:103,9,0 0/0:1:3:0,3,34 0/0:2:6:0,6,77
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20 10051498 . G . 4.06 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:3:9:0,9,95 ./.
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20 10051562 . C . 79.67 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:5:15:0,15,168 0/0:1:3:0,3,32
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20 10051596 rs6057128 C . 127.35 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,198 0/0:2:6:0,6,66 0/0:3:9:0,9,92
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20 10051650 . A . 54.39 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:1:3:0,3,37 0/0:2:6:0,6,63
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20 10051695 rs674711 G A 30301.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=12;HAPMAP;OMNI GT:DP:GQ:PL 1/1:4:12:144,12,0 0/1:5:18:18,0,95 0/0:3:9:0,9,93
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20 10051794 rs6039670 C . 9289.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:6:18:0,18,206 ./.
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20 10051795 . C . 146.54 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:6:18:0,18,213 ./.
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20 10051799 . G . 6.24 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,84 0/0:6:18:0,18,180 ./.
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20 10052024 rs115061412 G . 4632.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:6:18:0,18,208 0/0:4:12:0,12,134 0/0:3:9:0,9,112
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20 10052041 . T . 17.05 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:7:21:0,21,246 0/0:1:3:0,3,33 0/0:3:9:0,9,110
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20 10052197 . A . 49.03 PASS AC=0;AF=0.00;AN=6;DP=25 GT:DP:GQ:PL 0/0:9:27:0,27,317 0/0:8:24:0,24,272 0/0:8:24:0,24,291
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20 10052215 . C . 40.08 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:6:18:0,18,183 0/0:7:21:0,21,220 0/0:6:18:0,18,162
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20 10052308 . C . 341.14 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:1:3:0,3,27 0/0:9:27:0,27,291 0/0:3:9:0,9,86
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20 10052320 rs11699107 C . 1620.82 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14;OMNI GT:DP:GQ:PL 0/0:1:3:0,3,30 0/0:9:27:0,27,315 0/0:4:12:0,12,125
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20 10052349 rs6141112 G . 35724.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,97 0/0:7:21:0,21,241 0/0:2:6:0,6,59
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20 10052388 . C . 53.68 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:10:30:0,30,345 0/0:4:12:0,12,146 0/0:2:6:0,6,72
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20 10052444 . C . 45.03 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:5:15:0,15,176 0/0:2:6:0,6,68
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20 10052627 . G . 72.26 PASS AC=0;AF=0.00;AN=4;DP=16 GT:DP:GQ:PL 0/0:10:30:0,30,346 ./. 0/0:6:18:0,18,204
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20 10052688 rs73071551 C . 1722.29 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:6:18:0,18,209 0/0:3:9:0,9,109
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20 10052722 . T . 65.94 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,169 0/0:4:9:0,9,118 0/0:4:12:0,12,146
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20 10052862 rs114912368 T . 60.61 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,60 0/0:5:15:0,15,179 0/0:1:3:0,3,32
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20 10052903 rs117639817 T . 280.29 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:7:21:0,21,245 0/0:3:9:0,9,104
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20 10052956 rs77996925 A . 71.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,256 0/0:6:18:0,18,217 0/0:3:9:0,9,110
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20 10053017 rs6057129 A . 11051.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=19;HAPMAP GT:DP:GQ:PL 0/0:11:33:0,33,381 0/0:6:18:0,18,206 0/0:2:6:0,6,70
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20 10053023 rs6057130 T . 1165.98 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=19 GT:DP:GQ:PL 0/0:11:33:0,33,378 0/0:6:18:0,18,219 0/0:2:6:0,6,75
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20 10053037 rs76306648 G . 428.68 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,215 0/0:7:21:0,21,191 0/0:2:6:0,6,66
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20 10053158 rs62185613 T . 45.60 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,143 0/0:8:24:0,24,274 0/0:1:3:0,3,37
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20 10053182 . A . 70.52 PASS AC=0;AF=0.00;AN=6;DP=20 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:13:39:0,39,459 0/0:2:6:0,6,76
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20 10053267 rs59003876 G . 1331.39 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:7:21:0,21,223 0/0:3:9:0,9,112
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20 10053369 rs6087131 A G 26794.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=21 GT:DP:GQ:PL 0/0:12:36:0,36,424 0/0:7:21:0,21,238 1/1:2:6:69,6,0
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20 10053391 . A . 27.47 PASS AC=0;AF=0.00;AN=6;DP=21 GT:DP:GQ:PL 0/0:13:39:0,39,456 0/0:7:21:0,21,235 0/0:1:3:0,3,37
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20 10053395 rs515466 G C 32154.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=19 GT:DP:GQ:PL 1/1:12:36:365,36,0 0/1:6:70:70,0,86 0/0:1:3:0,3,37
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20 10053429 rs78614848 G A 6373.04 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/1:8:44:193,0,44 0/0:7:21:0,21,230 0/0:1:3:0,3,36
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20 10053456 . G . 6.03 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:4:12:0,12,140 0/0:1:3:0,3,31
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20 10053601 rs117516609 A . 114.81 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=21 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:9:24:0,24,284 0/0:6:18:0,18,213
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20 10053691 . A . 30.96 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:6:18:0,18,206 0/0:2:6:0,6,74
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20 10053704 rs6118870 C . 1461.63 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:9:27:0,27,290 0/0:5:15:0,15,171 0/0:2:6:0,6,65
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20 10053748 . A . 50.62 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:5:15:0,15,168 0/0:6:18:0,18,211
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20 10053752 . T . 105.78 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:5:15:0,15,184 0/0:6:18:0,18,222
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20 10053862 rs111387623 T . 640.92 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,253 0/0:3:9:0,9,110 0/0:5:15:0,15,173
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20 10053891 rs597497 C G 116255.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP GT:DP:GQ:PL 1/1:5:15:169,15,0 0/1:4:23:96,0,23 1/1:6:18:202,18,0
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20 10053950 . G . 132.85 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,129 0/0:7:21:0,21,217 0/0:3:9:0,9,105
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20 10053953 . G . 6.67 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:5:15:0,15,170 0/0:7:21:0,21,247 0/0:3:9:0,9,99
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20 10054000 rs112551079 C . 1679.64 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,206 0/0:6:18:0,18,195 0/0:3:9:0,9,86
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20 10054095 rs6087133 T C 15001.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=21;OMNI GT:DP:GQ:PL 0/0:9:27:0,27,316 0/0:6:18:0,18,213 1/1:6:18:204,18,0
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20 10054098 rs73897530 T . 790.12 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=23 GT:DP:GQ:PL 0/0:10:30:0,30,358 0/0:7:21:0,21,251 0/0:6:18:0,18,213
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20 10054134 rs76244800 A . 345.14 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=24 GT:DP:GQ:PL 0/0:7:21:0,21,248 0/0:13:36:0,36,430 0/0:4:12:0,12,144
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20 10054509 . T C 525.86 PASS AC=1;AF=0.17;AN=6;DP=16 GT:DP:GQ:PL 0/0:9:27:0,27,313 0/0:6:18:0,18,197 0/1:1:1.76:28,3,0
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20 10054776 . C . 107.03 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:2:6:0,6,70 0/0:3:9:0,9,104
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20 10054970 rs612615 A G 21482.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/1:4:16:16,0,95 ./. 0/0:4:12:0,12,147
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20 10055046 rs16996723 A G 23663.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:8:24:0,24,280 0/0:4:12:0,12,135 1/1:1:3:36,3,0
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20 10055348 rs113191484 C . 5718.04 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:3:9:0,9,102 ./.
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20 10055467 rs576874 A C 23482.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15;OMNI GT:DP:GQ:PL 0/1:4:57:57,0,62 0/1:8:99:113,0,113 0/0:3:9:0,9,110
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20 10055480 rs6057132 G T 22790.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:8:24:0,24,269 1/1:2:6:74,6,0
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20 10055557 . G . 119.11 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:6:18:0,18,213 0/0:1:3:0,3,27
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20 10055610 . G . 140.37 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,95 0/0:9:27:0,27,284 0/0:1:3:0,3,32
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20 10055643 rs112904073 A . 47.66 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,128 0/0:7:21:0,21,247 ./.
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20 10055737 rs79168651 G . 30.75 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:8:24:0,24,271 0/0:2:6:0,6,62
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20 10055760 . G . 150.03 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:8:24:0,24,258 0/0:3:9:0,9,101
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20 10055829 rs73243094 T . 1985.86 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:4:12:0,12,152 0/0:2:6:0,6,76
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20 10056026 rs6077638 C . 21426.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,188 0/0:7:21:0,21,204 ./.
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20 10056295 rs117672155 T . 1024.34 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,142 0/0:3:9:0,9,107 0/0:5:15:0,15,180
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20 10056339 . C . 39.72 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:4:12:0,12,126 0/0:2:6:0,6,61
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20 10056376 . C . 462.60 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:7:21:0,21,222 0/0:1:3:0,3,32 0/0:1:3:0,3,31
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20 10056468 rs112025669 G . 761.05 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,170 0/0:3:9:0,9,95 0/0:2:6:0,6,69
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20 10056653 . A . 79.33 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,124 0/0:2:6:0,6,68 0/0:1:3:0,3,36
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20 10056654 . C . 130.55 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL 0/0:5:15:0,15,161 0/0:2:6:0,6,49 ./.
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20 10056714 . G . 41.22 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL 0/0:5:15:0,15,168 ./. 0/0:2:6:0,6,72
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20 10056746 rs116827519 A . 101.51 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:8:24:0,24,276 0/0:2:6:0,6,73 0/0:2:6:0,6,72
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20 10056782 rs6039672 A . 774.25 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,165 0/0:2:6:0,6,72 0/0:1:3:0,3,35
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20 10056784 rs6039673 A . 753.64 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:2:6:0,6,74 0/0:1:3:0,3,36
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20 10056860 . G . 10.99 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:11:33:0,33,373 0/0:5:15:0,15,172 0/0:1:3:0,3,35
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20 10056963 . G . 60.29 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:3:9:0,9,106 0/0:4:12:0,12,146
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20 10056967 . G . 37.72 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:3:9:0,9,102 0/0:4:12:0,12,135
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20 10057095 . G . 116.25 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:7:21:0,21,233 0/0:3:9:0,9,97 0/0:1:3:0,3,38
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20 10057289 rs6057133 C . 1712.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,236 0/0:4:12:0,12,119 0/0:3:9:0,9,92
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20 10057489 rs112565589 G . 107.56 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:7:21:0,21,234 0/0:3:6:0,6,70 ./.
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20 10057599 . A . 144.65 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:4:12:0,12,142 0/0:2:6:0,6,60
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20 10057662 rs115154536 A . 191.93 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,37 0/0:4:12:0,12,143 0/0:2:6:0,6,60
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20 10057665 rs116922357 C . 615.86 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:3:9:0,9,99 0/0:2:6:0,6,57
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20 10057695 rs117219969 G . 171.71 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:6:18:0,18,198 0/0:1:3:0,3,36
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20 10057739 . G . 1391.28 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:4:12:0,12,138 0/0:1:3:0,3,32
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20 10057771 rs6077639 C . 661.82 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:2:6:0,6,69 0/0:1:3:0,3,34
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20 10057837 rs73897533 G . 378.65 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:4:12:0,12,133 0/0:1:3:0,3,37
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20 10057884 . G . 30.05 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:3:9:0,9,87 0/0:2:6:0,6,56
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20 10058022 rs531797 T C 21056.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP GT:DP:GQ:PL 1/1:2:6:65,6,0 0/0:4:12:0,12,126 0/0:7:21:0,21,246
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20 10058110 . A . 5.19 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,109 0/0:5:15:0,15,175 0/0:1:3:0,3,39
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20 10058236 . C . 94.95 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,138 0/0:4:12:0,12,126 0/0:2:6:0,6,55
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20 10058248 rs668473 G A 95540.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP;OMNI GT:DP:GQ:PL 1/1:4:12:130,12,0 0/1:6:18:18,0,146 1/1:1:3:36,3,0
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20 10058301 . C . 66.70 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:2:6:0,6,61 0/0:9:24:0,24,285 0/0:3:9:0,9,107
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20 10058395 rs112410108 C . 143.25 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,130 0/0:4:12:0,12,141 0/0:5:15:0,15,156
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20 10058422 . C . 28.86 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,64 0/0:4:12:0,12,136 0/0:4:12:0,12,143
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20 10058525 . G . 14.62 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:7:21:0,21,224 0/0:2:6:0,6,75
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20 10058552 . A . 7.54 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,36 0/0:2:6:0,6,66 0/0:3:9:0,9,111
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20 10058579 . C . 337.03 PASS AC=0;AF=0.00;AN=6;DP=4 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:2:6:0,6,71 0/0:1:3:0,3,35
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20 10058603 rs117494756 G . 235.61 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,54 0/0:4:12:0,12,123 0/0:1:3:0,3,30
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20 10058750 . G . 22.81 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:8:24:0,24,261 0/0:7:21:0,21,235 0/0:1:3:0,3,37
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20 10058878 . T . 43.48 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:6:18:0,18,220 0/0:3:9:0,9,108
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20 10058908 rs76504300 C . 8231.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:5:15:0,15,177 0/0:1:3:0,3,33
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20 10058918 . A . 740.24 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:5:15:0,15,180 0/0:1:3:0,3,34
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20 10058930 . C . 164.07 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:6:18:0,18,197 0/0:1:3:0,3,30
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20 10058947 . C . 294.08 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:3:9:0,9,98 0/0:10:30:0,30,326 0/0:1:3:0,3,35
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20 10059002 rs11907227 G . 739.69 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:10:30:0,30,326 ./.
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20 10059003 rs113552412 G . 31.43 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:10:30:0,30,330 ./.
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20 10059072 rs8122278 C A 13903.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=18;HAPMAP;OMNI GT:DP:GQ:PL 0/0:8:24:0,24,269 0/0:6:18:0,18,204 1/1:4:12:149,12,0
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20 10059170 rs486937 T . 3150.35 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=4;HAPMAP;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:2:6:0,6,71 ./.
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20 10059312 . T . 349.53 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:3:9:0,9,106 0/0:2:6:0,6,73
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20 10059366 rs74756026 C A 2466.43 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/1:2:25:30,0,25 0/0:3:9:0,9,88 0/0:3:9:0,9,105
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20 10059379 . C . 54.22 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:2:6:0,6,56 0/0:2:6:0,6,70
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20 10059491 . C . 543.43 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,188 0/0:4:12:0,12,117 0/0:3:9:0,9,95
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20 10059664 rs56299961 C . 2054.78 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,55 0/0:8:24:0,24,239 ./.
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20 10059807 . T . 46.51 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:5:15:0,15,178 0/0:3:9:0,9,113
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20 10059870 . G . 202.69 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,90 0/0:7:21:0,21,198 0/0:1:3:0,3,30
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20 10059883 . G . 48.50 PASS AC=0;AF=0.00;AN=4;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,89 0/0:8:24:0,24,263 ./.
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20 10059914 rs6087135 G T 11581.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:7:21:0,21,239 0/1:1:1.76:38,3,0
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20 10059970 . G . 35.75 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:5:15:0,15,177 ./.
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20 10060016 . T . 4.01 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:7:21:0,21,244 ./.
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20 10060059 . C . 360.04 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:7:21:0,21,240 0/0:1:3:0,3,37
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20 10060094 . C . 57.53 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,92 0/0:3:9:0,9,84 0/0:1:3:0,3,28
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20 10060095 . G . 79.20 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,89 0/0:3:9:0,9,105 0/0:1:3:0,3,36
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20 10060152 . G . 55.53 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,236 0/0:6:18:0,18,198 0/0:3:9:0,9,100
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20 10060423 rs75636000 T . 3136.26 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:6:18:0,18,206 0/0:1:3:0,3,38
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20 10060427 rs80201160 T . 749.11 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:7:21:0,21,239 0/0:1:3:0,3,38
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20 10060649 . A . 112.73 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,169 0/0:6:18:0,18,213 0/0:3:9:0,9,110
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20 10060681 rs12625228 T C 12412.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP GT:DP:GQ:PL 0/0:6:18:0,18,218 0/0:2:6:0,6,71 1/1:3:9:106,9,0
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20 10060703 . G . 27.61 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:6:18:0,18,203 0/0:2:6:0,6,64 0/0:4:12:0,12,136
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20 10060850 rs111449883 A . 249.76 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,199 0/0:5:15:0,15,169 0/0:3:9:0,9,94
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20 10060911 rs112011367 A . 264.42 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=22 GT:DP:GQ:PL 0/0:13:39:0,39,464 0/0:4:12:0,12,140 0/0:5:15:0,15,185
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20 10060934 rs113771733 G . 181.50 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=20 GT:DP:GQ:PL 0/0:10:30:0,30,329 0/0:5:15:0,15,161 0/0:5:15:0,15,178
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20 10060954 . A . 3.91 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:8:24:0,24,281 0/0:5:15:0,15,165 0/0:5:15:0,15,179
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20 10061016 . C . 84.37 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:6:18:0,18,192 0/0:4:12:0,12,144
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20 10061017 rs12480843 T . 29097.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:6:18:0,18,221 0/0:4:12:0,12,154
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20 10061156 . C . 13.09 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:9:27:0,27,286 0/0:4:12:0,12,140 0/0:2:6:0,6,68
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20 10061161 . C . 39.92 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:7:21:0,21,224 0/0:3:9:0,9,108 0/0:1:3:0,3,37
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20 10061170 . T . 902.32 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:8:24:0,24,281 0/0:7:18:0,18,209 0/0:2:6:0,6,73
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20 10061270 . C . 3.46 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:7:21:0,21,234 0/0:5:15:0,15,183 0/0:6:18:0,18,218
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20 10061358 . G . 3.30 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:8:24:0,24,271 0/0:3:9:0,9,113 0/0:2:6:0,6,71
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20 10061381 rs111382987 T . 277.51 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,181 0/0:4:12:0,12,143 0/0:2:6:0,6,63
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20 10061409 . T . 33.48 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:5:15:0,15,175 0/0:2:6:0,6,70
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20 10061486 rs6077646 A . 499.94 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,229 0/0:2:6:0,6,76 0/0:3:9:0,9,102
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20 10061579 rs58845330 T . 4349.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:9:27:0,27,304 0/0:2:6:0,6,76
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20 10061632 rs572450 C T 96731.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP GT:DP:GQ:PL 1/1:5:15:173,15,0 0/1:4:15:90,0,15 1/1:2:6:68,6,0
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20 10061659 rs111238965 T . 68.64 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:5:15:0,15,179 ./.
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20 10061786 . A . 165.75 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,133 0/0:7:21:0,21,246 0/0:4:12:0,12,149
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20 10062011 . A . 18.12 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:1:3:0,3,33 ./.
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20 10062012 . A . 159.64 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:1:3:0,3,33 ./.
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20 10062120 rs78426770 T A 1289.52 PASS AC=2;AF=0.33;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:4:12:0,12,143 1/1:3:9:115,9,0
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20 10062151 rs59455932 A . 4515.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:8:24:0,24,291 0/0:3:9:0,9,97 0/0:4:12:0,12,136
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20 10062185 rs62185614 G A 940.22 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/1:8:99:116,0,107 0/0:4:12:0,12,120 0/0:3:9:0,9,104
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20 10062329 rs73249031 T . 1209.64 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,213 0/0:5:15:0,15,169 ./.
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20 10062408 . T . 51.95 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:4:12:0,12,142 0/0:3:9:0,9,103
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20 10062531 rs6039677 A . 931.62 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:9:27:0,27,321 0/0:2:6:0,6,71 0/0:1:3:0,3,38
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20 10062623 . A . 37.31 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,149 0/0:6:18:0,18,182 ./.
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20 10062696 rs6032778 T . 2044.03 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:4:12:0,12,146 0/0:2:6:0,6,76 ./.
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20 10062755 . C . 55.60 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,200 0/0:6:18:0,18,203 0/0:2:6:0,6,74
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20 10062797 rs112279086 C . 53.69 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:7:21:0,21,234 0/0:3:9:0,9,94
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20 10062816 rs113863078 C . 94.74 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,129 0/0:8:21:0,21,245 0/0:1:3:0,3,32
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20 10062851 rs75367528 C . 2441.38 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:2:6:0,6,63 0/0:3:9:0,9,104
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20 10062909 . C . 34.09 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL ./. 0/0:2:6:0,6,70 0/0:2:6:0,6,59
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20 10062922 rs639089 T C 39710.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL ./. 0/1:3:24:24,0,55 1/1:2:6:53,6,0
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20 10063173 . T . 41.27 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:1:3:0,3,33 0/0:3:9:0,9,106
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20 10063203 rs117526135 G . 374.38 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:3:9:0,9,96 0/0:4:12:0,12,132
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20 10063306 . G . 509.86 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,104 0/0:3:9:0,9,103 0/0:2:6:0,6,60
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20 10063327 . G . 524.13 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,92 0/0:3:9:0,9,107 0/0:3:9:0,9,110
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20 10063390 rs77314339 A C 6289.04 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/1:6:54:119,0,54 0/0:7:21:0,21,241 0/0:3:9:0,9,96
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20 10063449 . A . 72.58 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,242 0/0:6:18:0,18,212 0/0:3:9:0,9,89
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20 10063529 . C . 42.63 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:5:12:0,12,151 0/0:3:9:0,9,105
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20 10063533 rs113200511 G . 243.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,92 0/0:6:15:0,15,177 0/0:2:6:0,6,71
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20 10063570 rs111769117 G . 110.86 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:8:21:0,21,235 0/0:1:3:0,3,32
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20 10063603 . C . 7.04 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:6:18:0,18,192 ./.
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20 10063665 rs112330261 C . 77.64 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:4:12:0,12,133 0/0:2:6:0,6,73
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20 10063721 rs74411633 C . 111.98 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:2:6:0,6,69 0/0:4:12:0,12,146
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20 10063784 . C . 696.55 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:4:12:0,12,127 0/0:3:9:0,9,104
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20 10063851 . C . 5.52 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:4:12:0,12,132 0/0:1:3:0,3,37
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20 10063907 . G . 162.90 PASS AC=0;AF=0.00;AN=4;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,170 0/0:6:18:0,18,205 ./.
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20 10063943 . A . 7.03 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:5:15:0,15,174 ./.
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20 10064034 . G . 91.58 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:4:12:0,12,127 0/0:3:9:0,9,101
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20 10064261 rs6039679 T . 2304.09 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:3:9:0,9,105 0/0:2:6:0,6,76
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20 10064298 . C . 33.94 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,164 0/0:2:6:0,6,69 0/0:3:9:0,9,94
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20 10064306 rs665917 T A 75129.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 1/1:5:15:178,15,0 0/1:2:22:22,0,29 1/1:3:9:113,9,0
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20 10064322 . A . 386.88 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,111 0/0:3:9:0,9,107 0/0:5:15:0,15,190
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20 10064472 . C . 303.35 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:6:18:0,18,204 0/0:5:15:0,15,172
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20 10064529 rs551927 A G 47610.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=16;HAPMAP;OMNI GT:DP:GQ:PL 1/1:2:6:52,6,0 0/1:8:7:7,0,215 1/1:6:18:172,18,0
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20 10064566 rs79050091 G T 516.63 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/1:5:51:91,0,51 0/0:6:18:0,18,204 0/0:5:15:0,15,170
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20 10064630 . G . 39.95 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,87 0/0:6:18:0,18,172 0/0:4:12:0,12,124
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20 10064663 . G . 11.85 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,157 0/0:5:15:0,15,170 0/0:3:9:0,9,98
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20 10064671 . G . 103.09 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,232 0/0:5:15:0,15,164 0/0:4:12:0,12,125
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20 10064798 . A . 56.64 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:3:9:0,9,101 0/0:6:18:0,18,222
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20 10064835 . T . 33.23 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:2:6:0,6,74 0/0:6:18:0,18,212
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20 10064950 . G . 101.35 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:4:12:0,12,121 0/0:3:9:0,9,83
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20 10064995 rs78418479 T G 5003.04 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/1:4:23:23,0,95 0/0:2:6:0,6,68 0/0:1:3:0,3,38
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20 10065033 . G . 237.47 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:8:24:0,24,263 0/0:4:12:0,12,125 0/0:3:9:0,9,108
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20 10065178 . A . 7.40 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,66 0/0:5:12:0,12,137 0/0:2:6:0,6,70
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20 10065188 . C . 1147.47 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,115 0/0:1:3:0,3,27 0/0:3:9:0,9,93
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20 10065215 . C . 93.91 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:6:18:0,18,188 0/0:4:12:0,12,130
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20 10065309 rs115384943 G . 1885.51 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=8;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,81 0/0:5:15:0,15,153 ./.
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20 10065365 rs79474568 C . 136 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:7:21:0,21,227 0/0:2:6:0,6,69
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20 10065382 . C . 32.52 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:6:18:0,18,193 0/0:2:6:0,6,74
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20 10065383 rs73249042 T . 1415.21 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,218 0/0:5:15:0,15,174 0/0:3:9:0,9,100
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20 10065396 rs115874853 C . 715.57 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:2:6:0,6,60 0/0:3:9:0,9,108
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20 10065501 . C . 106.60 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,94 0/0:7:21:0,21,227 0/0:3:9:0,9,102
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20 10065517 rs6039681 T . 1411.74 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:7:21:0,21,243 0/0:3:9:0,9,84
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20 10065594 . G . 153.11 PASS AC=0;AF=0.00;AN=4;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,126 0/0:10:30:0,30,325 ./.
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20 10065694 . T . 18.93 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:3:9:0,9,97 0/0:4:12:0,12,146
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20 10065835 . T . 21.28 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:6:18:0,18,204 0/0:1:3:0,3,36
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20 10066089 . G . 33.75 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,164 0/0:6:18:0,18,195 0/0:3:9:0,9,98
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20 10066174 . G . 115.24 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:2:6:0,6,69 0/0:5:15:0,15,167
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20 10066203 rs477987 C A 25950.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/1:3:29:64,0,29 0/1:1:1.76:34,3,0 0/0:6:18:0,18,206
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20 10066238 . G . 585 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:3:9:0,9,93 0/0:4:12:0,12,144
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20 10066603 rs58378875 T G 6408.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/1:8:71:71,0,144 ./. 0/0:7:21:0,21,250
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20 10066675 rs113888540 C . 1117.53 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,139 0/0:7:21:0,21,225 0/0:3:9:0,9,106
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20 10067090 rs507568 C A 40772.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:3:9:99,9,0 0/1:2:28:30,0,28 1/1:1:3:36,3,0
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20 10067106 rs11908389 C T 9486.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=6;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,96 0/0:2:6:0,6,50 1/1:1:3:37,3,0
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20 10067264 rs530271 G A 49087.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=18;HAPMAP;OMNI GT:DP:GQ:PL 0/1:6:80:82,0,80 0/1:7:77:112,0,77 1/1:5:15:180,15,0
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20 10067294 rs530362 C T 25031.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP GT:DP:GQ:PL 0/1:6:52:52,0,118 0/1:6:52:52,0,118 0/0:3:9:0,9,110
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20 10067299 . C . 26.42 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,129 0/0:5:15:0,15,156 0/0:3:9:0,9,90
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20 10067328 . A . 786.39 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:6:18:0,18,202 0/0:3:9:0,9,101
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20 10067468 . A . 96.55 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,211 0/0:9:27:0,27,306 0/0:1:3:0,3,37
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20 10067514 rs75937026 T . 1765.87 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:8:24:0,24,289 0/0:7:21:0,21,242 0/0:2:6:0,6,78
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20 10067677 . G . 216.91 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,76 0/0:4:12:0,12,131 0/0:1:3:0,3,38
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20 10067722 rs604416 A C 58493.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:6:18:189,18,0 0/1:4:20:20,0,86 1/1:1:3:34,3,0
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20 10067806 . G . 723.47 PASS AC=0;AF=0.00;AN=6;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:2:6:0,6,61 0/0:2:6:0,6,55
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20 10067834 . T . 51.61 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL ./. 0/0:4:12:0,12,140 0/0:1:3:0,3,37
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20 10067906 rs116374927 T . 1021.59 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:4:12:0,12,134 0/0:1:3:0,3,38
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20 10068346 . G . 108.61 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:3:9:0,9,86 0/0:2:6:0,6,56 0/0:1:3:0,3,30
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20 10068478 . T . 37.49 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:3:9:0,9,108 0/0:3:9:0,9,107
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20 10068488 rs6104550 T . 35435.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,142 0/0:5:15:0,15,181 0/0:4:12:0,12,146
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20 10068576 . G . 535.61 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,175 0/0:6:18:0,18,209 0/0:3:9:0,9,99
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20 10068578 . T . 413.47 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:6:18:0,18,207 0/0:2:6:0,6,63
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20 10068712 . C . 20.27 PASS AC=0;AF=0.00;AN=4;DP=13 GT:DP:GQ:PL 0/0:7:21:0,21,235 0/0:6:18:0,18,204 ./.
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20 10068977 . A . 117.61 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:4:12:0,12,123 0/0:1:3:0,3,38
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20 10068981 rs490505 G A 62231.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=8;OMNI GT:DP:GQ:PL 1/1:4:12:146,12,0 1/1:3:9:103,9,0 1/1:1:3:39,3,0
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20 10069030 rs7263576 C T 14682.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=6;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:2:6:0,6,65 1/1:1:3:37,3,0
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20 10069056 rs111426411 T . 82.58 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:3:9:0,9,104 0/0:1:3:0,3,37
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20 10069145 . A . 8.43 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:2:6:0,6,69 0/0:4:12:0,12,134
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20 10069272 . G . 52.71 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,152 0/0:4:12:0,12,118 0/0:2:6:0,6,52
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20 10069342 . G . 663.23 PASS AC=0;AF=0.00;AN=4;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,204 0/0:5:15:0,15,163 ./.
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20 10069419 rs74950032 T . 601.95 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:7:21:0,21,241 0/0:4:12:0,12,149
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20 10069534 . C . 174.30 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:6:18:0,18,198 0/0:4:12:0,12,141
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20 10069639 . C . 28.54 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:5:15:0,15,150 0/0:5:15:0,15,153
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20 10069721 . G . 90.60 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:5:15:0,15,158 0/0:10:0.97:6,0,258 0/0:4:12:0,12,129
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20 10069730 . C . 90.08 PASS AC=0;AF=0.00;AN=6;DP=21 GT:DP:GQ:PL 0/0:5:15:0,15,140 0/0:12:36:0,36,367 0/0:4:12:0,12,111
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20 10069913 rs78138532 G A 5003.04 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/1:3:25:64,0,25 0/0:10:30:0,30,340 0/0:3:9:0,9,105
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20 10069948 rs13045755 G . 39476.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,139 0/0:8:24:0,24,276 0/0:3:9:0,9,101
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20 10070032 rs520795 T C 19780.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:3:9:103,9,0 0/1:6:54:87,0,54 0/0:2:6:0,6,69
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20 10070073 . C . 133.80 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:4:12:0,12,111 0/0:1:3:0,3,27 0/0:1:3:0,3,35
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20 10070095 . A . 6.73 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL 0/0:2:6:0,6,71 ./. 0/0:1:3:0,3,38
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20 10070110 rs62185615 T . 29211.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:3:9:0,9,104 0/0:1:3:0,3,36
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20 10070127 rs74744419 A . 215.62 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:3:9:0,9,97 0/0:1:3:0,3,33
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20 10070243 . G . 140.91 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,204 0/0:4:12:0,12,126 0/0:1:3:0,3,39
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20 10070310 rs544580 C T 25836.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,65 0/1:4:21:83,0,21 0/0:1:3:0,3,34
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20 10070332 . T . 5.14 PASS AC=0;AF=0.00;AN=6;DP=5 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:1:3:0,3,33 0/0:1:3:0,3,27
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20 10070372 . C . 899.64 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:4:12:0,12,121 0/0:1:3:0,3,38
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20 10070429 rs56314197 A . 8.33 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:8:21:0,21,253 0/0:1:3:0,3,37
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20 10070520 . T . 66.21 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:6:15:0,15,195 0/0:1:3:0,3,38
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20 10070602 rs6039684 T . 3233.06 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:4:12:0,12,124 ./.
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20 10070643 rs55696140 A . 108.55 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:2:6:0,6,68 0/0:1:3:0,3,39
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20 10070770 rs56065205 G . 1318.15 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,48 0/0:4:12:0,12,121 0/0:2:6:0,6,53
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20 10070843 . A . 96.74 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:3:9:0,9,94 0/0:1:3:0,3,32
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20 10070936 rs78820543 T . 25813.04 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:5:15:0,15,176 ./.
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20 10070962 rs73897253 G . 187.97 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:2:6:0,6,64 0/0:2:6:0,6,68
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20 10071135 rs552048 C T 125000.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9;HAPMAP;OMNI GT:DP:GQ:PL 1/1:2:6:68,6,0 0/1:5:52:101,0,52 1/1:2:6:60,6,0
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20 10071187 rs6032780 G A 27442.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=14;HAPMAP;OMNI GT:DP:GQ:PL 0/1:4:49:60,0,49 0/0:6:18:0,18,196 0/0:4:12:0,12,117
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20 10071189 rs73897145 T . 106.93 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,130 0/0:6:18:0,18,220 0/0:4:12:0,12,145
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20 10071197 rs6077649 A G 19221.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=14;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:6:18:0,18,214 1/1:3:9:82,9,0
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20 10071347 rs6077650 G . 14258.04 PASS AC=0;AF=0.00;AN=2;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL ./. 0/0:6:18:0,18,184 ./.
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20 10071348 . G . 31.45 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL ./. 0/0:6:18:0,18,215 0/0:1:3:0,3,34
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20 10071497 rs79449684 T . 188.29 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,248 0/0:5:15:0,15,164 0/0:3:9:0,9,108
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20 10071507 rs6032781 C T 17553.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,202 0/0:5:15:0,15,166 1/1:3:9:113,9,0
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20 10071697 rs6032782 C T 18723.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,128 0/0:8:21:0,21,245 1/1:3:9:105,9,0
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20 10071848 rs6032783 T C 18141.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,74 0/0:7:21:0,21,241 1/1:4:12:143,12,0
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20 10071864 . G . 1022.28 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:3:9:0,9,88 0/0:7:21:0,21,204 0/0:4:12:0,12,123
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20 10071889 rs6032784 A G 18384.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:9:27:0,27,306 1/1:1:3:33,3,0
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20 10071890 rs6039685 T C 19056.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/1:5:18:18,0,129 0/0:9:27:0,27,316 0/0:1:3:0,3,39
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20 10072012 . A . 365.05 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:7:21:0,21,250 0/0:6:18:0,18,202 0/0:6:18:0,18,215
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20 10072092 . C . 99.99 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:3:9:0,9,104 0/0:1:3:0,3,38
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20 10072117 . C . 43.84 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:3:9:0,9,98 0/0:2:6:0,6,66 0/0:1:3:0,3,34
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20 10072126 rs73897148 A . 119.09 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:3:9:0,9,101 0/0:1:3:0,3,37
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20 10072136 . T C 917.26 PASS AC=1;AF=0.17;AN=6;DP=4 GT:DP:GQ:PL 0/0:1:3:0,3,27 0/0:2:6:0,6,69 0/1:1:1.76:37,3,0
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20 10072195 rs6039686 G C 17876.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,199 0/0:4:12:0,12,126 0/1:1:1.76:36,3,0
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20 10072392 rs6032785 C T 22408.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,139 0/0:8:24:0,24,263 1/1:2:6:77,6,0
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20 10072418 . G . 137.20 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:9:27:0,27,303 0/0:1:3:0,3,34
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20 10072454 rs6039687 G . 18518.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:7:21:0,21,228 ./.
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20 10072505 rs6032786 A . 3026.77 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:5:12:0,12,151 ./.
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20 10072523 . G . 70.84 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:4:12:0,12,139 ./.
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20 10072644 rs78528021 C T 4944.04 PASS AC=1;AF=0.17;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/1:5:57:57,0,78 0/0:3:9:0,9,101 0/0:5:15:0,15,166
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20 10072671 . G . 43.75 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:5:15:0,15,161 0/0:3:9:0,9,97
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20 10072739 . C . 27.98 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:6:18:0,18,196 0/0:1:3:0,3,35
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20 10072930 rs73897150 T . 55.72 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=19 GT:DP:GQ:PL 0/0:5:15:0,15,183 0/0:9:27:0,27,317 0/0:5:15:0,15,169
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20 10073001 . G . 31.71 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:8:24:0,24,267 0/0:3:9:0,9,97
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20 10073167 . G . 118.10 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:5:15:0,15,162 0/0:6:18:0,18,187 0/0:5:15:0,15,165
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20 10073248 rs503241 G A 68199.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 0/1:8:83:83,0,147 1/1:2:6:67,6,0 0/0:6:18:0,18,203
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20 10073407 . A . 443.29 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,104 0/0:5:15:0,15,171 0/0:2:6:0,6,71
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20 10073458 . G . 422.86 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,156 0/0:4:12:0,12,139 0/0:3:9:0,9,104
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20 10073508 . G . 319.93 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,128 0/0:4:12:0,12,123 0/0:3:9:0,9,83
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20 10073579 . T . 87.73 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:4:12:0,12,141 0/0:5:15:0,15,165
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20 10073668 . A . 32.71 PASS AC=0;AF=0.00;AN=6;DP=20 GT:DP:GQ:PL 0/0:7:21:0,21,245 0/0:8:24:0,24,267 0/0:5:15:0,15,167
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20 10073793 rs602209 G T 73977.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=9;HAPMAP;OMNI GT:DP:GQ:PL 0/1:3:23:62,0,23 1/1:5:15:177,15,0 0/0:1:3:0,3,37
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20 10073823 rs6039688 A G 17515.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:4:12:0,12,143 1/1:1:3:35,3,0
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20 10073862 . T . 47.63 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,176 0/0:6:18:0,18,206 0/0:1:3:0,3,35
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20 10073881 . C G 295.74 PASS AC=1;AF=0.17;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,96 0/1:5:54:88,0,54 0/0:1:3:0,3,26
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20 10073900 rs117308553 G . 1191.72 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:4:12:0,12,138 0/0:1:3:0,3,34
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20 10074010 rs603138 G C 55721.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=20 GT:DP:GQ:PL 0/1:9:99:103,0,120 1/1:6:18:197,18,0 0/0:5:15:0,15,172
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20 10074147 rs80351609 A . 166.29 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:10:27:0,27,316 ./.
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20 10074187 rs73071570 A . 17231.04 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=8;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:4:12:0,12,136 ./.
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20 10074192 rs6039689 C T 23902.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/1:3:26:67,0,26 0/0:5:15:0,15,169 ./.
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20 10074240 rs614270 T C 138125.04 PASS AC=4;AF=1.00;AN=4;DBSNP129;DBSNP132;DP=11;OMNI GT:DP:GQ:PL 1/1:5:15:171,15,0 1/1:6:18:208,18,0 ./.
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20 10074291 . G . 52.57 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:6:18:0,18,205 0/0:1:3:0,3,35
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20 10074346 . G . 12.01 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:2:6:0,6,63 0/0:6:15:0,15,153 0/0:3:9:0,9,96
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20 10074425 rs6039690 G A 21664.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=11;HAPMAP;OMNI GT:DP:GQ:PL 0/1:3:25:61,0,25 0/0:7:21:0,21,236 1/1:1:3:37,3,0
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20 10074511 rs1569894 A . 562.39 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:8:24:0,24,270 0/0:2:6:0,6,65 ./.
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20 10074531 rs557105 C T 62695.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=10;OMNI GT:DP:GQ:PL 0/1:7:50:50,0,119 1/1:3:9:92,9,0 ./.
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20 10074709 rs1569895 G . 31271.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,109 0/0:4:12:0,12,124 0/0:1:3:0,3,27
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20 10074716 rs2327236 G A 35378.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=9;OMNI GT:DP:GQ:PL 0/1:4:20:20,0,72 0/0:4:12:0,12,125 1/1:1:3:38,3,0
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20 10074731 rs112763931 A . 951.80 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,109 0/0:6:18:0,18,204 0/0:1:3:0,3,39
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20 10074806 rs2327237 G . 22464.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,87 0/0:8:24:0,24,233 0/0:2:6:0,6,53
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20 10074819 rs1569896 T . 776.36 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:9:27:0,27,320 0/0:3:9:0,9,110
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20 10074937 rs75673718 G . 2355.03 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:5:15:0,15,163 0/0:10:30:0,30,332 0/0:3:9:0,9,96
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20 10075043 rs617891 T C 126377.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 1/1:7:21:235,21,0 1/1:5:15:167,15,0 1/1:1:3:34,3,0
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20 10075072 . G . 161.66 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,143 0/0:5:15:0,15,145 0/0:1:3:0,3,29
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20 10075168 rs6032787 C T 18188.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/1:3:27:27,0,53 0/0:4:12:0,12,129 ./.
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20 10075243 . C . 48.69 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:9:27:0,27,288 0/0:3:9:0,9,95
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20 10075360 rs629879 A G 39725.04 PASS AC=4;AF=1.00;AN=4;DBSNP129;DBSNP132;DP=6;OMNI GT:DP:GQ:PL ./. 1/1:5:15:153,15,0 1/1:1:3:38,3,0
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20 10075408 rs77623623 G . 2100.90 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,172 0/0:4:12:0,12,119 0/0:1:3:0,3,28
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20 10075423 rs114033344 G . 1217.47 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:7:21:0,21,199 0/0:2:6:0,6,60 0/0:1:3:0,3,31
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20 10075463 rs6133792 G . 23675.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=5;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:1:3:0,3,33 ./.
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20 10075464 rs71334886 G . 6409.04 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:1:3:0,3,33 ./.
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20 10075479 rs630360 A G 78048.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=5;OMNI GT:DP:GQ:PL 0/1:4:20:20,0,95 1/1:1:3:27,3,0 ./.
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20 10075556 rs78906162 T . 330.60 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:4:12:0,12,136 0/0:5:15:0,15,156
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20 10075605 rs2224150 A . 4455.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,248 0/0:3:9:0,9,109 0/0:4:12:0,12,136
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20 10075625 . T . 49.28 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:1:3:0,3,37 0/0:4:0.17:14,0,101
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20 10075688 . G . 108.12 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:3:9:0,9,109 0/0:4:12:0,12,130
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20 10075856 . A . 346.11 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL 0/0:6:18:0,18,217 0/0:1:3:0,3,35 ./.
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20 10075927 rs6032788 T C 25556.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:5:12:0,12,151 1/1:2:6:71,6,0
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20 10075942 . C . 65.36 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:7:18:0,18,216 0/0:5:15:0,15,171
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20 10075991 . G . 71.74 PASS AC=0;AF=0.00;AN=6;DP=20 GT:DP:GQ:PL 0/0:7:21:0,21,242 0/0:9:27:0,27,302 0/0:4:12:0,12,138
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20 10076045 rs117383512 G . 148.93 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=19;OMNI GT:DP:GQ:PL 0/0:8:24:0,24,276 0/0:10:27:0,27,316 0/0:1:3:0,3,26
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20 10076250 rs644043 A G 57404.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 1/1:3:9:81,9,0 0/0:3:9:0,9,102 1/1:1:3:35,3,0
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20 10076339 rs644160 A G 71911.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=12;OMNI GT:DP:GQ:PL 1/1:5:15:165,15,0 0/0:6:18:0,18,197 1/1:1:3:37,3,0
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20 10076359 rs116228436 T . 391.51 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=19 GT:DP:GQ:PL 0/0:8:24:0,24,290 0/0:8:24:0,24,278 0/0:3:9:0,9,97
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20 10076389 . C . 62.81 PASS AC=0;AF=0.00;AN=6;DP=24 GT:DP:GQ:PL 0/0:11:33:0,33,360 0/0:10:30:0,30,309 0/0:3:9:0,9,105
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20 10076399 rs506458 G A 90466.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=17;OMNI GT:DP:GQ:PL 1/1:8:24:262,24,0 0/0:6:18:0,18,200 1/1:3:9:111,9,0
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20 10076406 . A . 72 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:8:24:0,24,281 0/0:5:15:0,15,175 0/0:3:9:0,9,111
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20 10076495 . A . 224.84 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:3:9:0,9,107 0/0:2:6:0,6,71
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20 10076526 . T . 31.10 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:5:15:0,15,162 0/0:1:3:0,3,38
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20 10076605 rs118187766 C . 1234.92 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:5:12:0,12,145 0/0:1:3:0,3,32
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20 10076741 rs116800867 G . 474.93 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,162 0/0:3:6:0,6,82 0/0:2:6:0,6,65
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20 10076749 rs8119856 G A 41668.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=11;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:4:9:0,9,116 1/1:2:6:70,6,0
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20 10076796 rs6133793 A G 40906.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/1:3:25:25,0,64 0/0:3:9:0,9,102 ./.
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20 10076860 rs6133794 A C 45386.04 PASS AC=2;AF=0.50;AN=4;DBSNP129;DBSNP132;DP=5;HAPMAP;OMNI GT:DP:GQ:PL 1/1:2:6:56,6,0 0/0:3:9:0,9,104 ./.
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20 10076879 rs111690378 A . 233.79 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=3 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:2:6:0,6,73 ./.
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20 10076904 . G . 3.56 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL ./. 0/0:2:6:0,6,69 0/0:2:6:0,6,69
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20 10077119 rs77915035 C . 3.63 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:2:6:0,6,68 0/0:2:6:0,6,68 ./.
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20 10077219 . G . 244.06 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:8:24:0,24,272 0/0:3:9:0,9,96 0/0:4:12:0,12,143
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20 10077267 rs59246685 A . 9566.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:6:18:0,18,217 0/0:3:9:0,9,106 0/0:3:9:0,9,112
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20 10077275 rs6032789 A G 59842.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/1:4:17:17,0,95 0/0:3:9:0,9,103 1/1:4:12:145,12,0
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20 10077294 . C . 74.12 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,131 0/0:1:3:0,3,38 0/0:2:6:0,6,72
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20 10077322 . A . 155.76 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:1:3:0,3,37 0/0:2:6:0,6,74
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20 10077469 rs115208836 T . 515.51 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:6:18:0,18,207 0/0:3:9:0,9,113
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20 10077596 rs115969310 A . 397.12 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:9:27:0,27,328 0/0:3:9:0,9,109 0/0:2:6:0,6,76
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20 10077728 rs113452390 C . 427.72 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,104 0/0:6:15:0,15,170 ./.
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20 10077737 . T . 3.91 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:5:15:0,15,171 ./.
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20 10077752 rs73071588 T . 2703.81 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:4:12:0,12,140 0/0:3:9:0,9,106 ./.
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20 10077794 . C . 34.98 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:4:12:0,12,116 0/0:1:3:0,3,27 0/0:1:3:0,3,32
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20 10077838 rs6039692 T . 435.44 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:8:24:0,24,285 0/0:4:12:0,12,139 0/0:2:6:0,6,71
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20 10077854 . G . 167.48 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:9:27:0,27,300 0/0:4:12:0,12,137 0/0:2:6:0,6,60
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20 10077863 . T . 56.15 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:9:27:0,27,320 0/0:4:12:0,12,144 0/0:2:6:0,6,76
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20 10077919 . C . 15.34 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,162 0/0:1:3:0,3,32 0/0:4:12:0,12,143
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20 10077985 rs6039693 T . 486.26 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:6:18:0,18,210 0/0:3:9:0,9,113
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20 10077994 . C . 28.87 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:5:15:0,15,171 0/0:3:9:0,9,101
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20 10077999 . C . 84.85 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,132 0/0:5:15:0,15,176 0/0:3:9:0,9,101
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20 10078310 . G . 3.36 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:4:12:0,12,135 0/0:10:30:0,30,337 0/0:3:9:0,9,106
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20 10078351 . A . 222.88 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,153 0/0:5:15:0,15,169 0/0:2:6:0,6,72
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20 10078402 . A . 6.92 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:5:12:0,12,137 0/0:4:12:0,12,140
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20 10078505 rs8123335 G A 50152.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=22 GT:DP:GQ:PL 0/0:7:21:0,21,239 0/0:6:18:0,18,206 1/1:9:27:318,27,0
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20 10078669 . G . 8.51 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:10:30:0,30,354 0/0:3:9:0,9,107
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20 10078775 . T . 23.30 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:2:6:0,6,74 0/0:10:30:0,30,353 0/0:3:9:0,9,110
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20 10078790 . T . 23.45 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:6:18:0,18,220 0/0:3:9:0,9,115
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20 10078824 rs115318118 G . 608.33 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,133 0/0:5:15:0,15,177 0/0:3:9:0,9,107
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20 10078870 rs114629246 G . 1297.05 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:9:27:0,27,288 0/0:4:12:0,12,137 0/0:4:12:0,12,138
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20 10078927 . G . 194.14 PASS AC=0;AF=0.00;AN=6;DP=21 GT:DP:GQ:PL 0/0:8:24:0,24,266 0/0:9:27:0,27,318 0/0:4:12:0,12,139
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20 10078978 . A . 237.18 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,183 0/0:3:9:0,9,106 0/0:4:12:0,12,149
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20 10079065 rs6039694 T C 45555.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/1:3:26:52,0,26 0/0:2:6:0,6,58 1/1:3:9:93,9,0
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20 10079152 rs115815419 T . 542.84 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,95 0/0:2:6:0,6,75 0/0:4:12:0,12,145
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20 10079381 . G . 132.07 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:3:9:0,9,107 0/0:4:12:0,12,148
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20 10079396 rs6039695 A G 52936.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/1:4:42:42,0,59 0/0:3:9:0,9,110 1/1:4:12:110,12,0
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20 10079509 . T . 33.41 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:5:15:0,15,169 0/0:4:12:0,12,137
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20 10079600 rs115749272 A . 870.83 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=24 GT:DP:GQ:PL 0/0:12:36:0,36,431 0/0:8:24:0,24,281 0/0:4:12:0,12,139
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20 10079647 rs78892358 A . 195.07 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:11:33:0,33,399 0/0:4:12:0,12,139 ./.
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20 10079678 . T . 11.16 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:5:12:0,12,137 0/0:2:6:0,6,69
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20 10079777 . T . 45.87 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:7:18:0,18,219 0/0:7:21:0,21,255
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20 10079821 rs57445006 C G 45200.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=21 GT:DP:GQ:PL 0/0:4:12:0,12,132 0/0:7:21:0,21,221 1/1:10:30:343,30,0
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20 10079864 rs114616245 A . 56.74 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,216 0/0:3:9:0,9,108 0/0:5:15:0,15,188
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20 10079882 rs73071595 C . 27.03 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,204 0/0:3:9:0,9,100 0/0:6:18:0,18,211
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20 10079932 . T . 269.35 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,63 0/0:5:12:0,12,125 0/0:3:9:0,9,104
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20 10079933 . T . 399.92 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:6:15:0,15,177 0/0:3:9:0,9,113
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20 10080019 . C . 348.96 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,153 0/0:4:12:0,12,127 0/0:3:9:0,9,96
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20 10080039 . G . 100.63 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,170 0/0:4:12:0,12,132 0/0:3:9:0,9,108
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20 10080130 . C . 70.02 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:2:6:0,6,69 0/0:7:21:0,21,248
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20 10080159 . T . 14.92 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:4:12:0,12,146 0/0:7:21:0,21,238 0/0:7:21:0,21,254
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20 10080273 rs56778721 T . 566.41 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:6:18:0,18,191 0/0:1:3:0,3,37
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20 10080311 rs62187260 C . 2411.49 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:2:6:0,6,67 0/0:1:3:0,3,37
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20 10080493 . T . 36.16 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,112 0/0:2:6:0,6,69 0/0:5:15:0,15,184
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20 10080536 rs113116633 C . 94.23 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:1:3:0,3,26 0/0:6:18:0,18,207
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20 10080655 rs6039696 C . 792.18 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10;HAPMAP GT:DP:GQ:PL 0/0:7:21:0,21,242 0/0:2:6:0,6,69 0/0:1:3:0,3,35
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20 10080683 . G . 89.05 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,235 0/0:5:15:0,15,161 0/0:3:9:0,9,104
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20 10080796 rs6039697 A C 57224.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP GT:DP:GQ:PL 1/1:3:9:100,9,0 0/0:5:15:0,15,167 1/1:5:15:163,15,0
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20 10080957 . A . 20.83 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:7:21:0,21,238 0/0:2:6:0,6,75
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20 10080978 . A . 7.78 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,170 0/0:7:21:0,21,247 0/0:1:3:0,3,39
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20 10081023 rs6039700 T C 28218.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=22;OMNI GT:DP:GQ:PL 0/1:9:76:173,0,76 0/0:11:33:0,33,381 0/0:2:6:0,6,73
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20 10081127 . T . 42.23 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:6:18:0,18,196 0/0:1:3:0,3,35
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20 10081128 rs6039701 T G 50441.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/1:2:26:28,0,26 0/0:6:18:0,18,207 1/1:1:3:34,3,0
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20 10081161 rs112606118 C . 44.07 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,110 0/0:5:15:0,15,156 0/0:2:6:0,6,63
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20 10081167 . G . 182.30 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,148 0/0:5:15:0,15,152 0/0:2:6:0,6,66
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20 10081309 . C . 136.03 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL 0/0:2:6:0,6,62 0/0:2:6:0,6,66 ./.
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20 10081318 rs6131049 G . 1129.39 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:3:9:0,9,85 0/0:2:6:0,6,54 ./.
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20 10081438 . G . 492.42 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,213 0/0:5:15:0,15,153 0/0:3:9:0,9,103
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20 10081592 . C . 113.68 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,227 0/0:4:12:0,12,139 0/0:1:3:0,3,32
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20 10081697 . C . 8.49 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:1:3:0,3,28 0/0:9:27:0,27,311 ./.
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20 10081698 . G . 51.80 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:9:27:0,27,262 ./.
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20 10081729 . T . 62.22 PASS AC=0;AF=0.00;AN=4;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:5:15:0,15,176 ./.
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20 10081750 rs473369 C . 37214.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:9:27:0,27,288 0/0:5:15:0,15,166 ./.
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20 10081800 rs474169 C T 39935.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:6:18:0,18,203 0/0:4:12:0,12,144 1/1:3:9:101,9,0
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20 10081812 rs1159123 G . 2569.54 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,133 0/0:4:12:0,12,142 0/0:4:12:0,12,134
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20 10081982 . A . 5.35 PASS AC=0;AF=0.00;AN=4;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,248 0/0:8:24:0,24,269 ./.
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20 10082050 . C . 51.64 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:6:18:0,18,197 0/0:1:3:0,3,35
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20 10082063 rs1159124 C T 28150.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=11;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:7:21:0,21,242 1/1:1:3:37,3,0
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20 10082065 rs2327238 T A 28911.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,106 0/0:5:15:0,15,164 1/1:1:3:37,3,0
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20 10082074 rs1159125 G . 1544.69 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,85 0/0:7:21:0,21,234 0/0:1:3:0,3,34
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20 10082174 . G . 32.12 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,231 0/0:7:21:0,21,247 0/0:2:6:0,6,67
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20 10082189 . T . 64.86 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:10:30:0,30,351 0/0:7:21:0,21,235 0/0:2:6:0,6,74
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20 10082304 rs111230567 A . 52.86 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,206 0/0:6:18:0,18,209 0/0:3:9:0,9,108
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20 10082476 rs6039702 A . 28140.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,181 0/0:7:21:0,21,238 0/0:3:9:0,9,115
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20 10082540 rs6108391 T . 1175.98 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:3:9:0,9,109 0/0:1:3:0,3,38
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20 10082567 . C . 4.51 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:8:24:0,24,266 0/0:4:12:0,12,127 0/0:1:3:0,3,33
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20 10082693 . C . 139.73 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:8:24:0,24,264 0/0:4:12:0,12,135 0/0:2:6:0,6,60
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20 10082798 rs115352748 T . 490 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;OMNI GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:5:15:0,15,158 0/0:3:9:0,9,113
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20 10082817 . T . 59.87 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:4:12:0,12,134 0/0:3:9:0,9,115
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20 10082854 . C . 43.80 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:4:12:0,12,139 0/0:3:9:0,9,101
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20 10082892 rs644145 C T 78001.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/1:4:25:25,0,86 0/1:5:58:58,0,88 0/0:2:6:0,6,70
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20 10083191 rs2327239 A T 53966.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=10;HAPMAP GT:DP:GQ:PL 0/0:1:3:0,3,35 0/1:6:10:160,0,10 0/0:3:9:0,9,109
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20 10083224 . C . 4.27 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,56 0/0:5:15:0,15,158 0/0:3:9:0,9,82
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20 10083269 rs6131050 C . 66.27 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=2 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:1:3:0,3,33 ./.
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20 10083314 . C . 36.69 PASS AC=0;AF=0.00;AN=4;DP=2 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:1:3:0,3,35 ./.
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20 10083498 . C . 70.13 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:7:21:0,21,234 0/0:2:6:0,6,62 0/0:2:6:0,6,74
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20 10083573 . T . 172.04 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:3:9:0,9,102 ./.
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20 10083615 . C . 69.21 PASS AC=0;AF=0.00;AN=4;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:5:15:0,15,152 ./.
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20 10083737 . G . 24.12 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:6:18:0,18,197 0/0:2:6:0,6,68
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20 10083753 . A . 89.13 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:8:24:0,24,272 0/0:2:6:0,6,68
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20 10083856 rs118170085 T . 867.13 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:8:24:0,24,287 0/0:5:15:0,15,166 0/0:3:9:0,9,108
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20 10083906 rs118069132 C . 39.69 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:10:30:0,30,343 0/0:7:21:0,21,234 ./.
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20 10083986 . G . 1721.90 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,101 0/0:3:9:0,9,103 0/0:3:9:0,9,109
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20 10084121 rs62187261 C T 44006.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=22 GT:DP:GQ:PL 0/0:10:30:0,30,328 0/1:8:85:156,0,85 0/0:4:12:0,12,127
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20 10084238 . T . 85.05 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:4:12:0,12,143 0/0:5:15:0,15,181
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20 10084475 . T . 127.57 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:8:24:0,24,287 0/0:3:9:0,9,109 0/0:6:18:0,18,208
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20 10084521 rs79884484 G . 122.06 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=20 GT:DP:GQ:PL 0/0:8:24:0,24,262 0/0:4:12:0,12,121 0/0:8:24:0,24,239
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20 10084591 rs73600276 C T 18153.04 PASS AC=3;AF=0.50;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/1:6:17:166,0,17 0/0:4:12:0,12,129 1/1:5:15:185,15,0
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20 10084659 . G . 538.44 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:4:12:0,12,134 0/0:1:3:0,3,37
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20 10084752 rs116253845 A . 964.38 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:2:6:0,6,71 0/0:2:6:0,6,73
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20 10084762 . G . 8.27 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,114 0/0:3:9:0,9,102 0/0:2:6:0,6,57
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20 10084856 . C . 36.83 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,200 0/0:4:12:0,12,132 0/0:3:9:0,9,103
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20 10084890 rs77856422 A . 791.68 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:5:15:0,15,169 0/0:4:12:0,12,148
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20 10084922 . A . 73.34 PASS AC=0;AF=0.00;AN=4;DP=13 GT:DP:GQ:PL ./. 0/0:8:21:0,21,251 0/0:5:15:0,15,185
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20 10085054 rs6074095 A G 72063.04 PASS AC=2;AF=0.50;AN=4;DBSNP129;DBSNP132;DP=8;HAPMAP GT:DP:GQ:PL 0/1:4:57:57,0,61 0/1:4:25:25,0,89 ./.
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20 10085197 rs75157872 T . 694.50 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,237 0/0:6:18:0,18,209 0/0:2:6:0,6,73
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20 10085211 rs685573 A . 29893.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=17;HAPMAP GT:DP:GQ:PL 0/0:7:21:0,21,237 0/0:8:24:0,24,270 0/0:2:6:0,6,75
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20 10085216 . A . 621.52 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:8:24:0,24,280 0/0:8:24:0,24,272 0/0:2:6:0,6,63
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20 10085284 . C . 402.73 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:5:15:0,15,166 0/0:3:9:0,9,106
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20 10085288 rs73897539 C . 1757.32 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,113 0/0:6:18:0,18,192 0/0:3:9:0,9,92
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20 10085320 rs6074096 C T 69593.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=12;HAPMAP;OMNI GT:DP:GQ:PL 0/1:2:24:28,0,24 0/1:5:48:94,0,48 0/0:5:15:0,15,172
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20 10085341 rs115510682 T . 1633.28 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,76 0/0:3:9:0,9,102 0/0:5:15:0,15,177
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20 10085482 . G . 55.79 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:11:33:0,33,362 0/0:4:12:0,12,135 0/0:1:3:0,3,37
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20 10085486 rs113972433 T . 10.48 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:10:30:0,30,358 0/0:4:12:0,12,146 0/0:1:3:0,3,39
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20 10085740 . A . 38.88 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,214 0/0:2:6:0,6,70 0/0:6:18:0,18,217
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20 10085871 rs2327240 C . 1213.52 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,98 0/0:3:9:0,9,100 0/0:2:6:0,6,64
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20 10086110 rs592026 G A 95581.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15;OMNI GT:DP:GQ:PL 0/1:6:51:123,0,51 0/1:8:37:37,0,171 0/0:1:3:0,3,34
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20 10086283 rs592889 G T 95100.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/1:3:27:62,0,27 0/1:4:22:22,0,92 0/0:3:9:0,9,105
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20 10086340 . C . 79.49 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,207 0/0:5:15:0,15,172 0/0:2:6:0,6,61
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20 10086432 . T . 42.71 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:6:18:0,18,203 0/0:2:6:0,6,75
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20 10086503 rs79976156 A . 661.70 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,207 0/0:5:15:0,15,185 0/0:3:9:0,9,103
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20 10086562 rs116430798 G . 234.55 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,159 0/0:5:15:0,15,170 ./.
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20 10086618 . A . 4.34 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:8:24:0,24,258 0/0:2:6:0,6,63
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20 10086619 rs513535 T . 12036.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:7:21:0,21,249 0/0:9:27:0,27,322 0/0:2:6:0,6,63
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20 10086674 . C . 136.36 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:10:30:0,30,345 0/0:2:6:0,6,74
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20 10086719 . C . 76.57 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,172 0/0:6:18:0,18,215 0/0:2:6:0,6,70
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20 10086783 rs6133798 A G 15698.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=20;HAPMAP GT:DP:GQ:PL 0/1:7:49:123,0,49 0/0:9:27:0,27,304 0/0:4:12:0,12,129
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20 10086799 rs6133799 G T 19499.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=19;HAPMAP GT:DP:GQ:PL 0/1:9:72:179,0,72 0/0:7:21:0,21,250 0/0:3:9:0,9,108
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20 10086800 . C . 23.81 PASS AC=0;AF=0.00;AN=6;DP=20 GT:DP:GQ:PL 0/0:11:33:0,33,347 0/0:6:18:0,18,218 0/0:3:9:0,9,105
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20 10086853 rs127733 G A 118199.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=18 GT:DP:GQ:PL 0/1:8:86:109,0,86 0/1:8:94:110,0,94 0/0:2:6:0,6,63
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20 10086867 . C . 42.56 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,129 0/0:6:18:0,18,197 0/0:1:3:0,3,32
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20 10086888 rs62187263 G . 1366.66 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,108 0/0:6:18:0,18,178 0/0:2:6:0,6,57
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20 10086954 rs595987 G A 99975.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/1:8:71:151,0,71 0/1:3:19:62,0,19 0/0:2:6:0,6,58
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20 10087092 . T . 111.98 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:1:3:0,3,38 0/0:3:9:0,9,105
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20 10087111 . C . 32.12 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:4:12:0,12,138 0/0:2:6:0,6,73 0/0:3:9:0,9,102
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20 10087171 . C . 87.80 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:5:15:0,15,163 0/0:9:27:0,27,290 0/0:1:3:0,3,37
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20 10087227 . T . 22.77 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:3:9:0,9,105 0/0:2:6:0,6,76
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20 10087230 rs607331 A G 103292.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/1:6:79:79,0,89 0/1:3:29:29,0,52 0/0:2:6:0,6,72
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20 10087394 rs608188 T . 15599.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9;HAPMAP GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:4:12:0,12,149 0/0:2:6:0,6,68
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20 10087450 rs6108392 C . 1288.25 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:5:15:0,15,162 0/0:4:12:0,12,143
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20 10087573 rs12480085 C . 7048.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 0/0:3:9:0,9,89 0/0:9:27:0,27,310 0/0:2:6:0,6,72
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20 10087606 . C . 7.34 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:6:18:0,18,195 0/0:2:6:0,6,64
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20 10087625 rs76437005 T . 2115.98 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,178 0/0:2:6:0,6,76
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20 10087646 . T . 61.71 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,141 0/0:8:24:0,24,286 0/0:1:3:0,3,38
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20 10087754 rs544718 T . 21030.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:4:12:0,12,147 0/0:2:6:0,6,75
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20 10087767 . T . 80.79 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:4:12:0,12,147 0/0:3:9:0,9,99
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20 10087804 rs609932 C T 81486.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/1:4:48:48,0,48 0/1:6:87:87,0,87 0/0:3:9:0,9,95
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20 10087842 rs79119810 A . 127.30 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:2:6:0,6,73 0/0:3:9:0,9,111
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20 10087900 . T . 162.28 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,109 0/0:1:3:0,3,32 0/0:6:18:0,18,220
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20 10087902 rs78562053 C . 2132.72 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=11;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:1:3:0,3,33 0/0:6:18:0,18,206
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20 10087935 . A . 184.75 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:5:15:0,15,166 0/0:8:24:0,24,286
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20 10088063 rs621673 C T 106359.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/1:3:21:21,0,44 0/0:2:6:0,6,62 0/0:2:6:0,6,71
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20 10088627 . G . 59.78 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:4:12:0,12,134 0/0:2:6:0,6,71
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20 10088699 rs498420 C T 67044.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/1:4:24:24,0,78 ./. 0/0:1:3:0,3,35
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20 10088730 rs624398 G A 42251.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 0/1:2:28:30,0,28 0/0:1:3:0,3,34 ./.
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20 10088736 rs624401 A C 38201.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 0/1:3:26:26,0,57 0/0:1:3:0,3,34 ./.
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20 10088747 rs624419 A G 37283.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 0/1:2:29:29,0,30 0/0:1:3:0,3,35 ./.
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20 10088799 rs624824 G A 50748.04 PASS AC=2;AF=0.50;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/1:3:27:27,0,48 0/1:3:26:26,0,54 ./.
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20 10088840 . G . 59.83 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,86 0/0:4:12:0,12,114 ./.
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20 10088868 . G . 71.10 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL 0/0:3:9:0,9,104 0/0:2:6:0,6,68 ./.
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20 10088895 rs500269 C T 40174.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 1/1:2:6:69,6,0 0/1:2:27:29,0,27 ./.
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20 10088929 . C . 5.53 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL 0/0:2:6:0,6,68 ./. 0/0:2:6:0,6,58
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20 10088957 rs74638463 C . 1019 PASS AC=0;AF=0.00;AN=2;DBSNP132;DP=2 GT:DP:GQ:PL ./. ./. 0/0:2:6:0,6,59
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20 10088980 rs4053110 T . 20119.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=2 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:1:3:0,3,35 ./.
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20 10088985 rs2876185 T C 40416.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 0/1:2:21:21,0,29 0/0:1:3:0,3,36 0/0:1:3:0,3,33
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20 10089120 . G . 215.84 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,61 0/0:2:6:0,6,61 0/0:3:9:0,9,82
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20 10089149 rs4372977 A G 58601.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:1:3:32,3,0 0/1:4:22:22,0,83 0/0:1:3:0,3,38
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20 10089316 . A . 100.68 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,252 0/0:4:12:0,12,138 0/0:4:12:0,12,150
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20 10089335 . T . 105.97 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:7:21:0,21,247 0/0:7:21:0,21,245 0/0:4:12:0,12,148
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20 10089386 . G . 5.98 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:9:27:0,27,299 0/0:5:15:0,15,154
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20 10089401 . A . 181.53 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:8:24:0,24,283 0/0:6:18:0,18,226
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20 10089428 . C . 124.42 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:4:12:0,12,137 0/0:6:18:0,18,190 0/0:6:18:0,18,201
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20 10089441 rs637625 A . 24454.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=18;HAPMAP GT:DP:GQ:PL 0/0:5:15:0,15,176 0/0:6:18:0,18,206 0/0:7:21:0,21,262
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20 10089447 . C . 119.82 PASS AC=0;AF=0.00;AN=6;DP=18 GT:DP:GQ:PL 0/0:6:18:0,18,203 0/0:6:18:0,18,209 0/0:6:18:0,18,202
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20 10089525 rs526819 C T 102103.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 1/1:5:15:176,15,0 0/1:6:40:109,0,40 0/0:4:12:0,12,125
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20 10089664 . C . 26.79 PASS AC=0;AF=0.00;AN=4;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:4:12:0,12,143 ./.
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20 10089681 rs78802526 G . 83.68 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,145 0/0:4:12:0,12,120 ./.
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20 10089814 rs6108396 C . 1876.10 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,132 0/0:4:12:0,12,142 0/0:5:15:0,15,180
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20 10089862 . T . 89.69 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:5:15:0,15,183 0/0:5:15:0,15,181
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20 10089867 . A . 1780.01 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:5:15:0,15,180 0/0:5:15:0,15,182 0/0:5:15:0,15,179
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20 10089957 rs79434184 G . 1117.85 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,83 0/0:5:15:0,15,168 ./.
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20 10090064 rs6032791 T . 223.81 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,175 0/0:4:12:0,12,139 0/0:1:3:0,3,37
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20 10090087 rs76718990 A . 983.85 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:7:21:0,21,240 0/0:1:3:0,3,37
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20 10090110 rs75586131 C . 1360.96 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:7:21:0,21,236 0/0:4:12:0,12,133 0/0:1:3:0,3,37
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20 10090152 rs73600278 G A 16364.04 PASS AC=3;AF=0.50;AN=6;DBSNP132;DP=11 GT:DP:GQ:PL 0/1:5:17:122,0,17 0/0:3:9:0,9,110 1/1:3:9:113,9,0
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20 10090166 rs6032792 A . 261.39 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:4:12:0,12,145 0/0:3:9:0,9,112
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20 10090349 rs73897550 T . 1101.86 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,71 0/0:6:18:0,18,217 0/0:2:6:0,6,69
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20 10090373 . G . 3.95 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,168 0/0:5:12:0,12,144 0/0:2:6:0,6,63
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20 10090394 . C . 178.66 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:6:18:0,18,198 0/0:6:15:0,15,173 0/0:3:9:0,9,92
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20 10090465 . C . 26.02 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,155 0/0:4:12:0,12,129 0/0:4:12:0,12,130
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20 10090468 . T . 27.74 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,133 0/0:5:15:0,15,168 0/0:4:12:0,12,138
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20 10090583 rs111722573 G . 258.42 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,98 0/0:4:9:0,9,112 0/0:2:6:0,6,72
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20 10090636 . G . 59.08 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,127 0/0:4:12:0,12,121 0/0:2:6:0,6,64
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20 10090751 . T . 87.41 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,146 0/0:3:9:0,9,94 0/0:1:3:0,3,37
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20 10090764 rs670562 A G 105032.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9;HAPMAP GT:DP:GQ:PL 1/1:6:18:187,18,0 0/1:2:21:21,0,26 1/1:1:3:29,3,0
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20 10090886 rs2064655 G A 70544.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=23;HAPMAP GT:DP:GQ:PL 0/1:11:99:146,0,170 0/1:6:73:73,0,87 0/0:6:18:0,18,212
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20 10090970 rs671426 T . 34337.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12;HAPMAP;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:4:12:0,12,139 0/0:4:12:0,12,143
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20 10091017 rs73602394 A G 13754.04 PASS AC=1;AF=0.25;AN=4;DBSNP132;DP=11 GT:DP:GQ:PL 0/1:3:14:14,0,63 0/0:8:21:0,21,238 ./.
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20 10091074 . G . 63.04 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:5:15:0,15,167 0/0:1:3:0,3,33
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20 10091078 . T . 66.08 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:4:12:0,12,138 0/0:2:6:0,6,76
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20 10091097 . G . 187.12 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:4:12:0,12,133 0/0:2:6:0,6,72
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20 10091131 . T . 44.92 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:4:12:0,12,134 0/0:2:6:0,6,70
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20 10091214 rs563455 C . 25920.04 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:5:15:0,15,159 ./.
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20 10091220 rs2064656 A G 50955.04 PASS AC=1;AF=0.25;AN=4;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:1:3:0,3,39 0/1:3:25:43,0,25 ./.
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20 10091430 . C . 53.31 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,200 0/0:4:12:0,12,124 0/0:3:9:0,9,106
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20 10091544 . G . 5.41 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:6:18:0,18,193 0/0:5:15:0,15,162 0/0:1:3:0,3,30
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20 10091898 rs6133800 C . 7754.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,27 0/0:3:9:0,9,101 0/0:1:3:0,3,35
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20 10092041 rs58176754 A G 14907.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/1:4:14:14,0,98 0/0:2:6:0,6,61 0/1:1:1.76:36,3,0
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20 10092135 rs78949676 G . 1328.16 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:9:27:0,27,307 0/0:6:18:0,18,208 0/0:3:9:0,9,98
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20 10092159 rs6133801 G A 19821.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 0/1:9:99:146,0,112 0/0:5:15:0,15,173 0/0:3:9:0,9,91
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20 10092177 . C . 31.68 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:6:18:0,18,204 0/0:3:9:0,9,107
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20 10092201 rs114716743 C . 413.88 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,96 0/0:4:12:0,12,132 0/0:3:9:0,9,84
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20 10092387 rs73897552 C . 11664.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,167 0/0:5:15:0,15,175 0/0:3:9:0,9,98
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20 10092415 rs590717 A . 31055.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:6:18:0,18,216 0/0:5:15:0,15,189
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20 10092423 rs7363053 T . 9633.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:5:15:0,15,181 0/0:5:15:0,15,182
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20 10092442 . G . 10.91 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:6:18:0,18,198 0/0:7:21:0,21,249
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20 10092505 rs4141508 G A 14400.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=14;HAPMAP;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,136 0/0:8:24:0,24,271 1/1:2:6:71,6,0
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20 10092538 rs114194128 G . 606.11 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:5:15:0,15,170 0/0:11:33:0,33,356 0/0:2:6:0,6,74
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20 10092541 rs73897553 T . 8545.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:11:33:0,33,376 0/0:2:6:0,6,76
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20 10092552 rs115386723 A . 613.27 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=21 GT:DP:GQ:PL 0/0:6:18:0,18,217 0/0:13:39:0,39,434 0/0:2:6:0,6,74
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20 10092586 . T . 85.74 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:7:21:0,21,251 0/0:7:18:0,18,223 0/0:2:6:0,6,59
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20 10092626 rs73897554 T . 7917.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15;OMNI GT:DP:GQ:PL 0/0:4:12:0,12,145 0/0:8:24:0,24,285 0/0:3:9:0,9,114
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20 10092642 rs6077654 T C 60352.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:3:9:0,9,108 0/1:8:93:93,0,119 0/0:2:6:0,6,73
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20 10092860 rs78788043 T . 764.67 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=20 GT:DP:GQ:PL 0/0:6:18:0,18,211 0/0:9:27:0,27,325 0/0:5:15:0,15,187
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20 10092963 rs6108397 C . 1174.79 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:3:9:0,9,99 0/0:9:27:0,27,301 0/0:5:15:0,15,146
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20 10093025 . A . 3.55 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:8:24:0,24,283 0/0:4:12:0,12,151
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20 10093104 . T . 27.53 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,178 0/0:6:18:0,18,210 0/0:2:6:0,6,70
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20 10093107 . T . 181.33 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:6:18:0,18,212 0/0:6:18:0,18,208 0/0:2:6:0,6,68
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20 10093154 . A . 67.61 PASS AC=0;AF=0.00;AN=6;DP=25 GT:DP:GQ:PL 0/0:10:30:0,30,358 0/0:13:39:0,39,436 0/0:2:6:0,6,65
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20 10093164 rs6108398 C . 9250.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=24;HAPMAP;OMNI GT:DP:GQ:PL 0/0:11:33:0,33,368 0/0:11:33:0,33,372 0/0:2:6:0,6,76
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20 10093220 . T . 55.82 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,179 0/0:6:18:0,18,202 0/0:2:6:0,6,76
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20 10093255 . C . 115.92 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,96 0/0:7:21:0,21,237 0/0:3:9:0,9,105
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20 10093270 . G . 45.69 PASS AC=0;AF=0.00;AN=6;DP=13 GT:DP:GQ:PL 0/0:4:12:0,12,126 0/0:6:18:0,18,182 0/0:3:9:0,9,109
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20 10093295 . T . 24.73 PASS AC=0;AF=0.00;AN=6;DP=20 GT:DP:GQ:PL 0/0:8:24:0,24,289 0/0:9:27:0,27,315 0/0:3:9:0,9,113
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20 10093310 rs115594187 C . 621.34 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=18 GT:DP:GQ:PL 0/0:8:24:0,24,238 0/0:7:21:0,21,220 0/0:3:9:0,9,83
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20 10093330 rs117915307 C . 1259.16 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:7:21:0,21,212 0/0:7:21:0,21,218 0/0:3:9:0,9,94
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20 10093446 rs11906197 C . 6853.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:3:9:0,9,96 0/0:9:27:0,27,298 0/0:5:15:0,15,174
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20 10093453 . G . 359.10 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:10:30:0,30,331 0/0:5:15:0,15,178
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20 10093613 rs79962450 C . 1815.33 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,102 0/0:5:15:0,15,174 ./.
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20 10093662 rs11906210 A . 2773.82 PASS AC=0;AF=0.00;AN=2;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL ./. 0/0:3:9:0,9,96 ./.
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20 10093684 . C . 26.72 PASS AC=0;AF=0.00;AN=2;DP=2 GT:DP:GQ:PL 0/0:2:6:0,6,67 ./. ./.
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20 10093755 . C . 328.97 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:2:6:0,6,58 ./.
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20 10093818 rs11908354 T . 2981.64 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:3:9:0,9,111 0/0:3:9:0,9,99 0/0:1:3:0,3,37
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20 10093882 rs12625051 C A 14710.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/1:4:23:23,0,78 0/0:4:12:0,12,113 1/1:2:6:69,6,0
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20 10093923 rs2423481 T . 27816.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:4:12:0,12,133 0/0:2:6:0,6,74
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20 10094025 . C . 4.54 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:7:21:0,21,233 0/0:1:3:0,3,35
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20 10094069 . A . 406.22 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:1:3:0,3,40 0/0:6:18:0,18,203 0/0:1:3:0,3,38
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20 10094070 . T . 66.60 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:1:3:0,3,39 0/0:6:18:0,18,208 0/0:1:3:0,3,37
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20 10094081 . C . 111.58 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,75 0/0:4:12:0,12,123 0/0:1:3:0,3,35
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20 10094148 rs73897557 G . 1309.93 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:7:21:0,21,244 ./. 0/0:1:3:0,3,37
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20 10094203 . C . 121.65 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,126 0/0:3:9:0,9,100 0/0:1:3:0,3,35
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20 10094237 . G . 9.30 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,97 0/0:4:12:0,12,125 0/0:1:3:0,3,30
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20 10094251 rs543895 T . 24089.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8;HAPMAP GT:DP:GQ:PL 0/0:3:9:0,9,108 0/0:4:12:0,12,137 0/0:1:3:0,3,38
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20 10094261 . A . 9.69 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:4:12:0,12,136 0/0:1:3:0,3,38
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20 10094293 . A . 16.78 PASS AC=0;AF=0.00;AN=6;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,177 0/0:3:9:0,9,97 0/0:2:6:0,6,73
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20 10094304 . G . 111.38 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:2:6:0,6,60 0/0:3:9:0,9,90
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20 10094447 . A . 58.59 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:5:15:0,15,175 0/0:7:21:0,21,227 0/0:2:6:0,6,76
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20 10094498 . T . 285.16 PASS AC=0;AF=0.00;AN=6;DP=9 GT:DP:GQ:PL 0/0:6:18:0,18,210 0/0:2:6:0,6,64 0/0:1:3:0,3,35
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20 10094532 rs8120341 G . 7369.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,151 0/0:3:9:0,9,93 0/0:1:3:0,3,28
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20 10094541 . A . 433.51 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,150 0/0:6:18:0,18,202 0/0:1:3:0,3,34
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20 10094582 rs56124148 A . 420.08 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,213 0/0:5:12:0,12,145 ./.
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20 10094591 rs8120356 G . 1508.60 PASS AC=0;AF=0.00;AN=4;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:6:18:0,18,205 0/0:5:12:0,12,140 ./.
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20 10094626 . C . 23.55 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,169 0/0:5:12:0,12,148 0/0:2:6:0,6,69
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20 10094774 rs570383 C . 28952.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13;HAPMAP;OMNI GT:DP:GQ:PL 0/0:5:15:0,15,154 0/0:6:18:0,18,194 0/0:2:6:0,6,64
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20 10094829 rs115766935 T . 280.26 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=17 GT:DP:GQ:PL 0/0:9:27:0,27,315 0/0:8:24:0,24,267 ./.
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20 10094844 . T . 61.59 PASS AC=0;AF=0.00;AN=4;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,223 0/0:8:24:0,24,280 ./.
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20 10094906 . G . 99.47 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:7:21:0,21,240 0/0:9:27:0,27,293 0/0:1:3:0,3,36
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20 10095026 . G . 81.61 PASS AC=0;AF=0.00;AN=6;DP=17 GT:DP:GQ:PL 0/0:5:15:0,15,171 0/0:8:24:0,24,252 0/0:4:12:0,12,147
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20 10095076 . G . 229.13 PASS AC=0;AF=0.00;AN=6;DP=19 GT:DP:GQ:PL 0/0:4:12:0,12,131 0/0:9:27:0,27,304 0/0:6:18:0,18,221
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20 10095132 rs1018485 G A 17921.04 PASS AC=3;AF=0.50;AN=6;DBSNP129;DBSNP132;DP=12;HAPMAP GT:DP:GQ:PL 0/1:5:57:57,0,74 0/0:3:9:0,9,91 1/1:4:12:150,12,0
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20 10095190 . A . 795.16 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:5:15:0,15,174 0/0:5:15:0,15,165 0/0:2:6:0,6,75
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20 10095287 . T . 420.50 PASS AC=0;AF=0.00;AN=4;DP=12 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:10:27:0,27,316 ./.
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20 10095355 . T . 234.68 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:4:12:0,12,134 0/0:4:12:0,12,134 0/0:4:12:0,12,145
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20 10095421 rs1474881 C . 5821.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=15;HAPMAP GT:DP:GQ:PL 0/0:5:15:0,15,166 0/0:7:21:0,21,230 0/0:3:9:0,9,105
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20 10095482 . C . 771.18 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:2:6:0,6,70 0/0:1:3:0,3,37
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20 10095516 rs77644475 T . 273.31 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:5:15:0,15,174 0/0:2:6:0,6,76
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20 10095696 . C . 41.54 PASS AC=0;AF=0.00;AN=6;DP=6 GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:3:9:0,9,99 0/0:1:3:0,3,38
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20 10095733 rs4481064 T . 4808.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:6:18:0,18,198 0/0:2:6:0,6,75
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20 10095741 rs489548 A . 34238.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:2:6:0,6,72 0/0:6:18:0,18,197 0/0:1:3:0,3,37
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20 10095894 rs78948688 C . 5618.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:10:30:0,30,323 0/0:5:15:0,15,158
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20 10095917 rs78475040 C . 5599.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,100 0/0:6:18:0,18,198 0/0:4:12:0,12,136
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20 10096106 rs74683450 C . 4142.04 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:4:12:0,12,132 0/0:2:6:0,6,68 0/0:2:6:0,6,71
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20 10096113 rs117069001 G . 265.14 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,69 0/0:3:9:0,9,89 0/0:2:6:0,6,73
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20 10096173 . C . 22.59 PASS AC=0;AF=0.00;AN=4;DP=8 GT:DP:GQ:PL ./. 0/0:4:12:0,12,144 0/0:4:12:0,12,138
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20 10096293 rs515940 C . 26303.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,86 0/0:7:21:0,21,235 0/0:3:9:0,9,105
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20 10096315 rs6104551 G . 2085.49 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,93 0/0:5:15:0,15,173 0/0:3:9:0,9,89
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20 10096357 rs6077656 A G 52430.04 PASS AC=2;AF=0.33;AN=6;DBSNP129;DBSNP132;DP=15 GT:DP:GQ:PL 0/1:5:54:84,0,54 0/1:6:83:83,0,87 0/0:4:12:0,12,140
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20 10096485 . C . 54.86 PASS AC=0;AF=0.00;AN=6;DP=16 GT:DP:GQ:PL 0/0:8:24:0,24,276 0/0:6:18:0,18,205 0/0:2:6:0,6,74
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20 10096596 rs518701 C . 35165.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:3:9:0,9,88 0/0:3:9:0,9,98 0/0:5:15:0,15,157
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20 10096625 rs6108400 T . 5288.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 0/0:5:15:0,15,173 0/0:2:6:0,6,67 0/0:2:6:0,6,76
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20 10096668 rs6032793 C . 5709.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,201 0/0:3:9:0,9,103 0/0:4:12:0,12,121
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20 10096733 rs11087006 C T 73900.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 1/1:4:12:142,12,0 0/1:4:23:23,0,79 1/1:4:12:148,12,0
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20 10096768 rs520453 A C 99144.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 1/1:4:12:138,12,0 0/1:3:24:24,0,67 1/1:3:9:103,9,0
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20 10096856 rs6032794 A . 1073.64 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=16 GT:DP:GQ:PL 0/0:5:15:0,15,182 0/0:7:21:0,21,238 0/0:4:12:0,12,135
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20 10096899 rs652086 G T 92638.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=17 GT:DP:GQ:PL 1/1:7:21:252,21,0 0/1:6:17:17,0,164 1/1:4:12:151,12,0
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20 10096925 rs112273134 T . 1520.34 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:6:18:0,18,214 0/0:4:12:0,12,147 0/0:3:9:0,9,112
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20 10096933 rs652126 G C 94912.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 1/1:5:15:160,15,0 0/1:4:56:56,0,58 1/1:3:9:106,9,0
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20 10096958 rs652494 G A 99019.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:3:9:108,9,0 0/1:3:26:26,0,63 1/1:3:9:111,9,0
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20 10097040 . C . 633.12 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:2:6:0,6,65 0/0:4:12:0,12,132 0/0:6:18:0,18,201
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20 10097075 rs6077657 T G 92150.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=14 GT:DP:GQ:PL 1/1:3:9:105,9,0 0/1:4:23:88,0,23 1/1:7:21:226,21,0
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20 10097079 . A . 52.30 PASS AC=0;AF=0.00;AN=6;DP=15 GT:DP:GQ:PL 0/0:4:12:0,12,147 0/0:5:15:0,15,176 0/0:6:18:0,18,228
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20 10097194 . G . 615.14 PASS AC=0;AF=0.00;AN=4;DP=7 GT:DP:GQ:PL 0/0:1:3:0,3,35 0/0:6:18:0,18,178 ./.
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20 10097255 . C . 6.78 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,59 0/0:4:12:0,12,123 0/0:2:6:0,6,54
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20 10097256 . G . 9.28 PASS AC=0;AF=0.00;AN=6;DP=7 GT:DP:GQ:PL 0/0:2:6:0,6,60 0/0:3:9:0,9,96 0/0:2:6:0,6,53
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20 10097284 rs6104552 G . 489.84 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:3:9:0,9,99 0/0:3:9:0,9,109
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20 10097373 rs6104553 G . 1143.38 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:3:9:0,9,95 0/0:1:3:0,3,31
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20 10097547 . A . 7.94 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL ./. 0/0:4:12:0,12,140 0/0:1:3:0,3,34
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20 10097622 rs115103118 T . 690.74 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:3:9:0,9,107 0/0:8:24:0,24,266 0/0:2:6:0,6,62
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20 10097626 rs665397 C . 26852.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/0:3:9:0,9,103 0/0:7:21:0,21,229 0/0:2:6:0,6,68
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20 10097751 rs6074097 T C 58594.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=7 GT:DP:GQ:PL 1/1:1:3:33,3,0 0/1:6:36:36,0,97 ./.
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20 10097789 rs550824 T C 62283.04 PASS AC=6;AF=1.00;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 1/1:1:3:33,3,0 1/1:3:9:92,9,0 1/1:1:3:34,3,0
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20 10097902 . G . 311.97 PASS AC=0;AF=0.00;AN=4;DP=5 GT:DP:GQ:PL ./. 0/0:4:12:0,12,118 0/0:1:3:0,3,37
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20 10097925 . C . 636.73 PASS AC=0;AF=0.00;AN=2;DP=4 GT:DP:GQ:PL ./. 0/0:4:12:0,12,135 ./.
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20 10097928 rs666732 G A 69148.04 PASS AC=3;AF=0.75;AN=4;DBSNP129;DBSNP132;DP=6 GT:DP:GQ:PL 1/1:1:3:25,3,0 0/1:5:50:50,0,85 ./.
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20 10098073 . G . 459.17 PASS AC=0;AF=0.00;AN=4;DP=4 GT:DP:GQ:PL 0/0:1:3:0,3,34 0/0:3:9:0,9,105 ./.
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20 10098098 . C . 170.54 PASS AC=0;AF=0.00;AN=2;DP=3 GT:DP:GQ:PL ./. 0/0:3:9:0,9,102 ./.
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20 10098110 rs6108402 G C 60509.04 PASS AC=1;AF=0.50;AN=2;DBSNP129;DBSNP132;DP=4 GT:DP:GQ:PL ./. 0/1:4:53:56,0,53 ./.
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20 10098134 . G . 287.71 PASS AC=0;AF=0.00;AN=6;DP=5 GT:DP:GQ:PL 0/0:1:3:0,3,33 0/0:3:9:0,9,93 0/0:1:3:0,3,34
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20 10098135 rs6108403 C A 55427.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 1/1:1:3:33,3,0 0/1:3:26:26,0,53 1/1:1:3:39,3,0
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20 10098199 . A . 10.43 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL 0/0:1:3:0,3,26 ./. 0/0:2:6:0,6,72
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20 10098237 . A . 5500.04 PASS AC=0;AF=0.00;AN=2;DP=1 GT:DP:GQ:PL ./. ./. 0/0:1:3:0,3,37
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20 10098255 . G . 11.69 PASS AC=0;AF=0.00;AN=2;DP=2 GT:DP:GQ:PL ./. ./. 0/0:2:6:0,6,67
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20 10098265 . T . 3084.10 PASS AC=0;AF=0.00;AN=4;DP=3 GT:DP:GQ:PL ./. 0/0:1:3:0,3,40 0/0:2:6:0,6,64
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20 10098344 rs71330255 A G 7241.04 PASS AC=2;AF=0.50;AN=4;DBSNP132;DP=2 GT:DP:GQ:PL ./. 0/0:1:3:0,3,38 1/1:1:3:32,3,0
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20 10098492 . A T 1170.54 PASS AC=2;AF=1.00;AN=2;DP=1 GT:DP:GQ:PL ./. 1/1:1:3:40,3,0 ./.
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20 10098569 . G . 167.26 PASS AC=0;AF=0.00;AN=2;DP=1 GT:DP:GQ:PL ./. 0/0:1:3:0,3,33 ./.
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20 10098613 . A . 106.49 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10098617 . T . 94.69 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10098629 . G . 209.32 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10098660 . G . 436.57 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10098704 . A . 210.79 PASS AC=0;AF=0.00;AN=0;DP=0 GT:DP:PL ./. ./. ./.
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20 10098740 . T . 99.52 PASS AC=0;AF=0.00;AN=4;DP=2 GT:DP:GQ:PL ./. 0/0:1:3:0,3,28 0/0:1:3:0,3,38
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20 10098892 . G . 92.26 PASS AC=0;AF=0.00;AN=2;DP=1 GT:DP:GQ:PL ./. 0/0:1:3:0,3,27 ./.
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20 10098911 . G . 86.49 PASS AC=0;AF=0.00;AN=2;DP=1 GT:DP:GQ:PL 0/0:1:3:0,3,33 ./. ./.
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20 10098921 . C . 221.43 PASS AC=0;AF=0.00;AN=2;DP=1 GT:DP:GQ:PL 0/0:1:3:0,3,33 ./. ./.
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20 10098945 rs56176249 T C 18776.04 PASS AC=2;AF=0.50;AN=4;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 1/1:1:3:33,3,0 0/0:2:6:0,6,68 ./.
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20 10098987 rs78421384 C . 1532.65 PASS AC=0;AF=0.00;AN=4;DBSNP132;DP=4 GT:DP:GQ:PL 0/0:2:6:0,6,67 0/0:2:6:0,6,64 ./.
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20 10099029 rs13044987 T C 12461.04 PASS AC=2;AF=1.00;AN=2;DBSNP129;DBSNP132;DP=1 GT:DP:GQ:PL 1/1:1:3:28,3,0 ./. ./.
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20 10099034 rs13043768 C A 11867.04 PASS AC=2;AF=1.00;AN=2;DBSNP129;DBSNP132;DP=1 GT:DP:GQ:PL 1/1:1:3:27,3,0 ./. ./.
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20 10099035 rs6039709 G . 1030.68 PASS AC=0;AF=0.00;AN=2;DBSNP129;DBSNP132;DP=1 GT:DP:GQ:PL 0/0:1:3:0,3,25 ./. ./.
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20 10099044 rs13043626 A . 2447.90 PASS AC=0;AF=0.00;AN=0;DBSNP129;DBSNP132;DP=0 GT:DP:PL ./. ./. ./.
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20 10099046 rs13044995 T . 2373.43 PASS AC=0;AF=0.00;AN=0;DBSNP129;DBSNP132;DP=0 GT:DP:PL ./. ./. ./.
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20 10099055 rs13045001 T C 12271.04 PASS AC=2;AF=1.00;AN=2;DBSNP129;DBSNP132;DP=1 GT:DP:GQ:PL 1/1:1:3:35,3,0 ./. ./.
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20 10099079 rs13043786 C T 23237.04 PASS AC=4;AF=1.00;AN=4;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 1/1:2:6:69,6,0 ./. 1/1:1:3:34,3,0
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20 10099139 . T . 104.17 PASS AC=0;AF=0.00;AN=6;DP=3 GT:DP:GQ:PL 0/0:1:3:0,3,32 0/0:1:3:0,3,31 0/0:1:3:0,3,35
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20 10099140 rs585009 G T 52621.04 PASS AC=4;AF=0.67;AN=6;DBSNP129;DBSNP132;DP=3 GT:DP:GQ:PL 1/1:1:3:32,3,0 0/0:1:3:0,3,34 1/1:1:3:33,3,0
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20 10099190 rs508242 G T 68375.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 1/1:2:6:65,6,0 0/1:2:23:23,0,27 1/1:1:3:37,3,0
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20 10099220 rs585404 A G 58600.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 1/1:1:3:34,3,0 0/1:3:20:20,0,39 1/1:1:3:36,3,0
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20 10099250 rs585439 G . 14135.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=5 GT:DP:GQ:PL 0/0:2:6:0,6,53 0/0:2:3:0,3,45 0/0:1:3:0,3,28
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20 10099314 . T . 288.88 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:3:9:0,9,105 0/0:2:6:0,6,59 0/0:3:9:0,9,103
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20 10099326 . A . 771.70 PASS AC=0;AF=0.00;AN=6;DP=8 GT:DP:GQ:PL 0/0:2:6:0,6,70 0/0:3:9:0,9,93 0/0:3:9:0,9,113
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20 10099376 . C . 5.81 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,126 0/0:4:12:0,12,135 0/0:3:9:0,9,103
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20 10099378 rs36039508 C . 11627.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,124 0/0:4:12:0,12,122 0/0:3:9:0,9,101
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20 10099473 rs6133802 A G 13017.04 PASS AC=1;AF=0.17;AN=6;DBSNP129;DBSNP132;DP=12 GT:DP:GQ:PL 0/1:6:54:122,0,54 0/0:5:15:0,15,148 0/0:1:3:0,3,38
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20 10099477 . C . 58.31 PASS AC=0;AF=0.00;AN=6;DP=12 GT:DP:GQ:PL 0/0:6:18:0,18,189 0/0:5:15:0,15,157 0/0:1:3:0,3,28
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20 10099481 . C . 15.38 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,234 0/0:6:18:0,18,201 0/0:1:3:0,3,27
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20 10099491 . C . 136.82 PASS AC=0;AF=0.00;AN=4;DP=10 GT:DP:GQ:PL 0/0:5:15:0,15,154 0/0:5:15:0,15,149 ./.
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20 10099535 rs586791 G A 118695.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=8;HAPMAP GT:DP:GQ:PL 1/1:4:12:134,12,0 0/1:3:25:25,0,55 1/1:1:3:38,3,0
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20 10099565 rs532882 C T 119541.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=11 GT:DP:GQ:PL 1/1:4:12:145,12,0 0/1:6:52:52,0,96 1/1:1:3:38,3,0
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20 10099627 . A . 167.66 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,246 0/0:4:12:0,12,137 0/0:3:9:0,9,112
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20 10099629 . A . 4 PASS AC=0;AF=0.00;AN=6;DP=14 GT:DP:GQ:PL 0/0:7:21:0,21,250 0/0:4:12:0,12,143 0/0:3:9:0,9,112
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20 10099650 rs77143260 A . 173.52 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=15 GT:DP:GQ:PL 0/0:7:21:0,21,243 0/0:5:15:0,15,180 0/0:3:9:0,9,100
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20 10099670 rs77626021 C . 1365.75 PASS AC=0;AF=0.00;AN=6;DBSNP132;DP=13 GT:DP:GQ:PL 0/0:5:15:0,15,161 0/0:4:12:0,12,136 0/0:4:12:0,12,131
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20 10099699 rs6108404 C . 555.04 PASS AC=0;AF=0.00;AN=6;DBSNP129;DBSNP132;DP=10 GT:DP:GQ:PL 0/0:2:6:0,6,59 0/0:4:12:0,12,131 0/0:4:12:0,12,122
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20 10099755 rs534687 C T 98717.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=9 GT:DP:GQ:PL 1/1:1:3:36,3,0 0/1:4:27:27,0,89 1/1:4:12:142,12,0
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20 10099832 rs534882 A G 112504.04 PASS AC=5;AF=0.83;AN=6;DBSNP129;DBSNP132;DP=18 GT:DP:GQ:PL 1/1:9:27:300,27,0 0/1:5:58:69,0,58 1/1:4:12:142,12,0
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20 10099905 . A . 512.87 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:4:12:0,12,144 0/0:6:18:0,18,196 0/0:1:3:0,3,39
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20 10099928 . G . 4.05 PASS AC=0;AF=0.00;AN=6;DP=11 GT:DP:GQ:PL 0/0:5:15:0,15,159 0/0:5:15:0,15,168 0/0:1:3:0,3,35
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