Eric Banks 619a69a5f1 As promised in the release notes for 1.6, I am removing the old deprecated genotyping framework revolving around the misordering of alleles and have moved the fixed version in its place in preparation for release 1.7 (or 2.0?).		2012-05-01 16:18:24 -04:00
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CoverageBySample.java	Optimize imports run on the whole project, public and private. I just got too tired of all of the unused imports floating around. Confirmed that the system builds after the changes.	2011-07-17 20:29:58 -04:00
GATKDocsExample.java	@Hidden for DocumentationTest and GATKDocsExample	2011-09-23 09:03:37 -04:00
GATKPaperGenotyper.java	As promised in the release notes for 1.6, I am removing the old deprecated genotyping framework revolving around the misordering of alleles and have moved the fixed version in its place in preparation for release 1.7 (or 2.0?).	2012-05-01 16:18:24 -04:00