gatk3的最后一个经典版本3.8

Khalid Shakir ca48f04fb8 Better handling in pre QC R scripts for older projects (whole_exome_agilent_designed_120) that came out before some metrics were added to Picard. ... PCT_PF_READS was plotted with a plot title for PCT_PF_ALIGNED_READS. Now plotting both metrics separately.		2012-01-13 16:31:56 -05:00
public	Updated SortingVCFWriterBase to use PriorityBlockingQueue so that the class is thread-safe	2012-01-13 09:33:16 -05:00
settings	Revving Picard to incorporate final version of ReadWalker performance improvements.	2012-01-10 12:12:33 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice.	2012-01-08 12:11:55 -05:00
ivy.xml	No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice.	2012-01-08 12:11:55 -05:00