depristo 8f461d3c40 Critical bug fix for VariantEval dbSNP calculations. Moved the system over to the new improved ROD iterators, resulting in dbSNP rates jumping 5% or so, due to masking of true SNPs by preceding indels. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2274 348d0f76-0448-11de-a6fe-93d51630548a		2009-12-07 03:36:38 +00:00
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examples	Update naming for consistency.	2009-06-30 22:03:21 +00:00
gatk/walkers	Critical bug fix for VariantEval dbSNP calculations. Moved the system over to the new improved ROD iterators, resulting in dbSNP rates jumping 5% or so, due to masking of true SNPs by preceding indels.	2009-12-07 03:36:38 +00:00
tools	Stage 2 of Variation refactoring:	2009-12-06 06:48:03 +00:00
utils	More archiving (with permission from Andrey) plus a move to core.	2009-12-03 15:40:27 +00:00