85 lines
2.9 KiB
XML
85 lines
2.9 KiB
XML
<project name="AnalysisTK" default="dist" basedir="." xmlns:ivy="antlib:org.apache.ivy.ant">
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<description>Compile and distribute the Sting analysis toolkit</description>
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<!-- set global properties for this build -->
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<property name="src" location="src"/>
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<property name="build" location="build"/>
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<property name="dist" location="dist"/>
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<property name="lib" location="lib"/>
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<property name="javadoc" location="javadoc" />
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<path id="classpath">
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<fileset dir="${lib}" includes="*.jar" />
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</path>
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<!-- ivy properties -->
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<property name="ivy.install.version" value="2.0.0" />
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<property name="ivy.home" value="${user.home}/.ant" />
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<property name="ivy.jar.dir" value="${ivy.home}/lib" />
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<property name="ivy.jar.file" value="ivy-${ivy.install.version}.jar" />
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<property name="ivy.settings.dir" value="settings" />
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<property file="${ivy.settings.dir}/ivysettings.properties" />
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<target name="resolve" depends="init"
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description="locate and download library dependencies">
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<!-- retrieve ivy if necessary -->
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<mkdir dir="${ivy.jar.dir}" />
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<get src="http://repo1.maven.org/maven2/org/apache/ivy/ivy/${ivy.install.version}/${ivy.jar.file}"
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dest="${ivy.jar.dir}/${ivy.jar.file}"
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usetimestamp="true"/>
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<!-- initialize and load ivy -->
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<taskdef resource="org/apache/ivy/ant/antlib.xml"
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uri="antlib:org.apache.ivy.ant"
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classpath="${ivy.jar.dir}/${ivy.jar.file}" />
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<ivy:settings file="${ivy.settings.dir}/ivysettings.xml" />
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<!-- retrieve dependencies -->
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<ivy:retrieve />
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</target>
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<target name="init">
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<!-- Create the time stamp -->
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<tstamp/>
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<!-- Create the build directory structure used by compile -->
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<mkdir dir="${build}"/>
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</target>
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<target name="compile" depends="init,resolve"
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description="compile the source">
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<!-- Compile the java code from ${src} into ${build} -->
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<javac srcdir="${src}" destdir="${build}" classpathref="classpath"
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debug="true" debuglevel="lines,vars,source" />
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</target>
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<target name="dist" depends="compile"
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description="generate the distribution" >
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<mkdir dir="${dist}"/>
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<pathconvert property="jar.classpath" pathsep=" " refid="classpath">
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<flattenmapper />
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</pathconvert>
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<jar jarfile="${dist}/AnalysisTK.jar" basedir="${build}">
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<manifest>
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<attribute name="Class-Path" value="${jar.classpath}" />
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<attribute name="Main-Class" value="org.broadinstitute.sting.gatkk.GenomeAnalysisTK" />
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</manifest>
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</jar>
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<copy todir="${dist}">
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<fileset dir="${lib}" includes="*.jar" />
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</copy>
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</target>
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<target name="javadoc">
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<mkdir dir="${javadoc}" />
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<javadoc sourcepath="${src}" destdir="${javadoc}" />
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</target>
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<target name="clean"
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description="clean up" >
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<delete dir="${build}"/>
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<delete dir="${dist}"/>
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<delete dir="${lib}" />
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</target>
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</project>
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