Ryan Poplin c9944d81ef Skip array needs to also be used in the updateDataForRead function of the delocalized BQSR.		2012-09-04 10:33:37 -04:00
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src/org/broadinstitute/sting	Skip array needs to also be used in the updateDataForRead function of the delocalized BQSR.	2012-09-04 10:33:37 -04:00
test/org/broadinstitute/sting/gatk/walkers	Fixing bug from when FragmentUtils merging function moved over to the soft clipped start instead of the unclipped start	2012-08-30 10:10:43 -04:00