Ryan Poplin d70bb59182 HaplotypeCaller now calls insertion events that aren't fully assembled as symbolic alleles.		2012-07-10 14:22:23 -06:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	HaplotypeCaller now calls insertion events that aren't fully assembled as symbolic alleles.	2012-07-10 14:22:23 -06:00
test	Bug fix when specifying a JEXL expression for a field that doesn't exist: we should treat the whole expression as false, but we were rethrowing the JEXL exception in this case. Added integration test to cover this in SelectVariants	2012-07-10 13:59:00 -04:00