c85100ce9c
bug: When performing multiple hard clip operations in a read that has indels, if the N+1 hardclip requests to clip inside an indel that has been removed by one of the (1..N) previous hardclips, the hard clipper would go out of bounds. fix: dynamically adjust the boundaries according to the new hardclipped read length. (this maintains the current contract that hardclipping will never return a read starting or ending in indels). |
||
|---|---|---|
| public | ||
| settings | ||
| .gitignore | ||
| LICENSE | ||
| build.xml | ||
| ivy.xml | ||