gatk-3.8/protected
Eric Banks c752b9bca6 Fixed a small feature/bug that I introduced with the spanning deletions genotyping.
In the case where there's a low quality SNP under a spanning deletion in the gvcfs:
if the SNP is not genotyped by GenotypeGVCFs (because it's just noise) we were still
emitting a record with just the symbolic DEL allele (because that allele is high quality).

We no longer do that.
2015-05-13 11:19:40 -04:00
..
gatk-package-distribution Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
gatk-queue-extensions-distribution Regression: The new 'includeUnmapped' PartitionBy annotation was incorrectly set for HC 2015-03-13 00:24:57 -04:00
gatk-queue-package-distribution Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
gatk-tools-protected Fixed a small feature/bug that I introduced with the spanning deletions genotyping. 2015-05-13 11:19:40 -04:00
pom.xml Update pom versions to mark the start of GATK 3.4 development 2014-10-23 22:31:44 -04:00