kiran 7d889c0661 Refactored into oblivon. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@276 348d0f76-0448-11de-a6fe-93d51630548a		2009-04-02 22:12:15 +00:00
..
fourbasecaller	Refactored into oblivon.	2009-04-02 22:12:15 +00:00
gatk	Print coverage per reference base for each sample in a merged BAM file.	2009-04-02 21:35:31 +00:00
illumina	Fixed a bug in the parsing of the second end of the pair.	2009-03-24 14:34:37 +00:00
indels	Reorganized GenomeLoc code to more clearly and better use the picard SequenceDictionary information.	2009-03-28 20:37:27 +00:00
utils	Simple improvements to allele caller	2009-04-02 14:09:14 +00:00
ValidateSAM.java	generic declarations added here and there to eliminate a few annoying warnings; no consequential changes	2009-04-02 20:53:01 +00:00