gatk3的最后一个经典版本3.8

Christopher Hartl c492185be6 Merge branch 'master' of gsa2:/humgen/gsa-scr1/chartl/dev/unstable		2012-09-20 12:56:07 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Fixing edge case bug in the Exact model (both standard and generalized) where we could abort prematurely in the special case of multiple polymorphic alleles and samples with widely different depths of coverage (e.g. exome and low-pass). In these cases it was possible to call the site bi-allelic when in fact it was multi-allelic (but it wouldn't cause it to create a monomorphic call).	2012-09-20 10:59:42 -04:00
public	Merge branch 'master' of gsa2:/humgen/gsa-scr1/chartl/dev/unstable	2012-09-20 12:56:07 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00