gatk3的最后一个经典版本3.8
 
 
 
 
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Khalid Shakir c3c7f17d90 Updated hard limit MathUtils.MAXN number of samples from 11,000 to 50,000.
Instead of creating a supposed network temporary directory locally which then fails when remote nodes try to access the non-existant dir, now checking to see if they network directory is available and throwing a SkipException to bypass the test when it cannot be run.
TODO: Throw similar SkipExceptions when fastas are not available. Right now instead of skipping the test or failing fast the REQUIRE_NETWORK_CONNECTION=false means that the errors popup later when the networked fastas aren't found.
2012-05-29 11:18:22 -04:00
licensing Remove old licensing 2012-04-25 12:23:08 -04:00
protected/java/src/org/broadinstitute/sting build system overhaul 2012-05-17 15:16:29 -04:00
public Updated hard limit MathUtils.MAXN number of samples from 11,000 to 50,000. 2012-05-29 11:18:22 -04:00
settings Testing of BCF codec 2012-05-24 10:57:01 -04:00
.gitignore Minor additions to the shared .gitignore file, now that Mark has checked one in. 2011-10-26 12:24:28 -04:00
build.xml build.xml now copies report files to ~/private_html for convenient viewing 2012-05-28 10:22:09 -04:00
ivy.xml Final updates to integration tests for BCF2 2012-05-24 10:58:59 -04:00