gatk-3.8/public/java
Michael McCowan c3a933ce84 Adaptations to accomodate Tribble API changes, comprising mostly of the following.
* Refactoring implementations of readHeader(LineReader) -> readActualHeader(LineIterator), including nullary implementations where applicable.
* Galvanizing fo generic types.
* Test fixups, mostly to pass around LineIterators instead of LineReaders.
* New rev of tribble, which incorporates a fix that addresses a problem with TribbleIndexedFeatureReader reading a header twice in some instances.
* New rev of sam, to make AbstractIterator visible (was moved from picard -> sam in Tribble API refactor).
2013-08-19 15:52:47 -04:00
..
config
src Adaptations to accomodate Tribble API changes, comprising mostly of the following. 2013-08-19 15:52:47 -04:00
test Adaptations to accomodate Tribble API changes, comprising mostly of the following. 2013-08-19 15:52:47 -04:00