gatk-3.8/public/scala/src/org/broadinstitute/sting/queue
kshakir 55ac4ba70b Added another utility that can convert to RemoteFiles.
QScripts will now generate remote versions of files if the caller has not already passed in remote versions (or the QScript replaces the passed in remote references... not good)
Instead of having yet another plugin, combined QStatusMessenger and RemoteFileConverter under general QCommandPlugin trait.
2012-10-17 20:00:03 -04:00
..
engine Moved the class field caching from QScript to a ClassFieldCache utility. 2012-10-16 18:49:31 -04:00
extensions Moved the class field caching from QScript to a ClassFieldCache utility. 2012-10-16 18:49:31 -04:00
function Moved the class field caching from QScript to a ClassFieldCache utility. 2012-10-16 18:49:31 -04:00
library Fix edge case for very small VCFs 2012-01-19 00:51:28 -05:00
util Added another utility that can convert to RemoteFiles. 2012-10-17 20:00:03 -04:00
QCommandLine.scala Added another utility that can convert to RemoteFiles. 2012-10-17 20:00:03 -04:00
QCommandPlugin.scala Added another utility that can convert to RemoteFiles. 2012-10-17 20:00:03 -04:00
QException.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
QScript.scala Added another utility that can convert to RemoteFiles. 2012-10-17 20:00:03 -04:00
QScriptManager.scala Fixed package error and a few deprecated scala warnings. 2012-10-15 15:29:40 -04:00
QSettings.scala Changed the default memory limit from none to 2GB upon suggestions from delangel, carneiro, and depristo. 2012-08-20 21:41:13 -04:00