Phillip Dexheimer 3354c07b1c Added optional element "includeUnmapped" to the PartitionBy annotation ... * The value of this element (default true) determines whether Queue will explicitly run this walker over unmapped reads * This patch fixes a runtime error when FindCoveredIntervals was used with Queue * PT 81777160		2015-01-31 15:47:57 -05:00
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src/main/java/org/broadinstitute/gatk/queue/extensions/gatk	Added optional element "includeUnmapped" to the PartitionBy annotation	2015-01-31 15:47:57 -05:00
pom.xml	Split all imports of tools|engine from utils, and all tools from engine.	2014-10-24 20:59:46 +08:00