gatk-3.8/scala/qscript
rpoplin 1d11e88899 Adding another example call set to GATK resource bundle for use in VQSR wiki tutorial
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5774 348d0f76-0448-11de-a6fe-93d51630548a
2011-05-05 21:16:33 +00:00
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core Adding another example call set to GATK resource bundle for use in VQSR wiki tutorial 2011-05-05 21:16:33 +00:00
examples When /etc/mailname is unreadable fall back to the hostname. 2011-04-11 20:22:44 +00:00
lib Thanks to mark: VCFInfoToTable removed in favor of a more flexible walker. Slight change to the argument structure of the walker to make it play more nicely with Queue: the field list parsing is pushed into the command line system (e.g. the variable is exposed as a List<String> and not a String, so Queue doesn't have to join a list into a string only to have it broken out again. This also allows the user to specify -F field1 -F field2 -F field3 if he/she so desires. 2010-12-15 03:33:36 +00:00
oneoffs oops, putting the script back into a sensible state 2011-05-04 20:17:05 +00:00
playground Removed extraneous import 2011-05-05 18:51:03 +00:00