ebanks c2df35b7fe - get leftmost position of indel correct ... - don't try to clean reads with mapping quality of 0 - un-deprecate git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@813 348d0f76-0448-11de-a6fe-93d51630548a		2009-05-26 17:24:58 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	- get leftmost position of indel correct	2009-05-26 17:24:58 +00:00
test/org/broadinstitute/sting	Changed the name to reflect the sorted nature of the set, added some fixes	2009-05-22 22:34:24 +00:00