gatk-3.8/java/src/org/broadinstitute/sting/alignment
hanna c1e53d407d The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had
unicode quote characters embedded in it.  These characters were invisible inside
IntelliJ but cause compile warnings for Ryan and Aaron, who for whatever reason
have a different default charset.  Fixed.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3203 348d0f76-0448-11de-a6fe-93d51630548a
2010-04-20 15:26:32 +00:00
..
bwa Misc bug fixes. 2010-01-05 14:48:19 +00:00
reference Misc bug fixes. 2010-01-05 14:48:19 +00:00
Aligner.java Minor tweak to improve ease-of-use of iterator system. 2009-11-20 18:24:19 +00:00
Alignment.java BWA: odds and ends. Get rid of some spurious debug code that was accidentally 2009-11-22 15:26:07 +00:00
AlignmentValidationWalker.java The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had 2010-04-20 15:26:32 +00:00
AlignmentWalker.java The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had 2010-04-20 15:26:32 +00:00
CountBestAlignmentsWalker.java The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had 2010-04-20 15:26:32 +00:00
package-info.java Help system content for the alignment module. 2009-12-11 16:01:25 +00:00