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gatk-3.8/public/java/test/org/broadinstitute/sting/utils/fragments
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Mark DePristo 034a997d07 Generalized Reads -> Fragment calculation 
-- Supports ReadBackedPileup -> FragmentCollection as before
-- Added support for List<SAMRecord> -> FragmentCollection for Ryan's haplotype caller
-- General cleanup, renaming, move to separate package, more extensive unit tests, etc.
-- Added toFragment() function to ReadBackedPileup interface
 		2011-10-26 15:54:38 -04:00
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FragmentUtilsBenchmark.java Generalized Reads -> Fragment calculation 2011-10-26 15:54:38 -04:00
FragmentUtilsUnitTest.java Generalized Reads -> Fragment calculation 2011-10-26 15:54:38 -04:00